WormBase Tree Display for Gene: WBGene00069509

WBGene00069509 SMap: S_parent: Sequence: Crem_Contig145
  Identity: Version: 3
    Name: CGC_name: Cre-idhb-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE17015
      Molecular_name: CRE17015
        CRE17015.1
        RP08903
      Other_name: cr01.sctg150.wum.7
      Public_name: Cre-idhb-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:28 WBPerson1847 Event: Created
        2 03 Jul 2008 11:46:25 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE17015
                Other_name: cr01.sctg150.wum.7
        3 08 Dec 2011 12:03:58 WBPerson2970 Name_change: CGC_name: Cre-idhb-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: idhb
    RNASeq_FPKM: WBls:0000004 25.1934 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        27.5829 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        29.9724 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 103.419 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        62.1098 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        90.0434 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        97.0585 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        97.3224 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        97.5863 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
      WBls:0000038 105.473 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
        91.8949 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        98.7322 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        98.8288 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
            RNASeq.remanei.WBls:0000038.control_median
      WBls:0000041 35.0217 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        43.5442 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        49.0589 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        53.9171 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        55.6918 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        62.3248 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        65.3346 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        68.2186 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
      WBls:0000063 (12)
      WBls:0000101 82.71 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
        87.5702 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
    GO_annotation: 00163851
    Ortholog: WBGene00007993 Caenorhabditis elegans From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00036287 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00145154 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00134562 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00111219 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00222910 Brugia malayi From_analysis: WormBase-Compara
      WBGene00239114 Onchocerca volvulus From_analysis: WormBase-Compara
      CBOVI.g3654 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g14066 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g9928 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g13486 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g20653 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g24615 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g728 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g18499 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g19352 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g1113 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00446.g10944 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-idhb-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold628.g7097 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01911.g23839 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_03807.g31293 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_15307 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_022586 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g01313 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g19465 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0028400 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g20534 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00264565 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00264567 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00294241 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00061757 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00066738 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00060100 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to be involved in tricarboxylic acid cycle. Is an ortholog of C. elegans idhb-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE17015
    Corresponding_transcript: CRE17015.1
    Other_sequence (92)
  Experimental_info: Expr_pattern: Expr1110716
    Microarray_results: GPL14146_CRE17015_633-692_0.874_15_C
      GPL14146_CRE17015_805-864_0.911_2_B
      GPL14146_CRE17015_813-872_0.906_4_A
  Method: Gene