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WormBase Tree Display for Gene: WBGene00073862

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Name Class

WBGene00073862SMapS_parentSequenceCrem_Contig1055
IdentityVersion2
NameSequence_nameCRE07923
Molecular_nameCRE07923
CRE07923.1
RP38216
Other_namecr01.sctg952.wum.3
Public_nameCRE07923
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:29WBPerson1847EventCreated
203 Jul 2008 11:46:42WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE07923
Other_namecr01.sctg952.wum.3
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000429.3463From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
31.1476From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
32.9488From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:00000270.190467From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
0.907458From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
1.49241From_analysisRNASeq.remanei.WBls:0000027.control_median
1.96146From_analysisRNASeq.remanei.WBls:0000027.control_mean
2.07737From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
4.67055From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
WBls:00000380.391013From_analysisRNASeq.remanei.WBls:0000038.control_mean
0.510332From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
0.662707From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:00000410.311838From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
0.42252From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
0.510533From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
0.530549From_analysisRNASeq.remanei.WBls:0000041.control_median
0.549761From_analysisRNASeq.remanei.WBls:0000041.control_mean
0.550565From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
0.708669From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
0.794443From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
WBls:00000630.107147From_analysisRNASeq.remanei.WBls:0000063.control_mean
0.277119From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
0.349975From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
0.444372From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
RNASeq.remanei.WBls:0000063.control_median
WBls:00001010.386247From_analysisRNASeq.remanei.total_over_all_stages.control_median
2.91092From_analysisRNASeq.remanei.total_over_all_stages.control_mean
OrthologWBGene00006311Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00027077Caenorhabditis briggsaeFrom_analysisOMA
WBGene00125970Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00152469Caenorhabditis brenneriFrom_analysisOMA
WBGene00115082Pristionchus pacificusFrom_analysisInparanoid_8
CBOVI.g10793Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g2203Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP28.g17376Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g21750Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g16144Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g16145Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g15747Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g15171Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g4043Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
Cang_2012_03_13_00500.g11592Caenorhabditis angariaFrom_analysisWormBase-Compara
Csp5_scaffold_00364.g10176Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_014784Caenorhabditis remaneiFrom_analysisWormBase-Compara
Sp34_40104800Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g16190Caenorhabditis elegansFrom_analysisWormBase-Compara
Paralog (37)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Galactose-binding-like domain superfamily; Sad1 / UNC-like C-terminal; and SUN domain. Is an ortholog of C. elegans sun-1. In C. elegans, sun-1 is involved in several processes, including centrosome localization; embryo development; and regulation of centrosome duplication.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE07923
Corresponding_transcriptCRE07923.1
Experimental_infoExpr_patternExpr1111303
Microarray_resultsGPL14146_CRE07923_1217-1276_0.951_1_A
MethodGene