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WormBase Tree Display for Gene: WBGene00109808

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Name Class

WBGene00109808SMapS_parentSequencePPA_ChrX
IdentityVersion2
NameCGC_namePpa-set-20.3From_analysisInferred_from_orthology
Sequence_namePPA20254
Molecular_namePPA20254
PPA20254.1
PP66277
Other_nameGENEPREDICTION_SNAP300000077064
UMM-S2857-0.24Person_evidenceWBPerson606
Public_namePpa-set-20.3
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:06WBPerson4055EventImportedfrom NGASP
228 Jul 2021 11:12:29WBPerson1983Name_changeCGC_namePpa-set-20.3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classset
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
OrthologWBGene00150517Caenorhabditis brenneriFrom_analysisOMA
WBGene00150114Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00035134Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035140Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00222977Brugia malayiFrom_analysisWormBase-Compara
WBGene00226014Brugia malayiFrom_analysisWormBase-Compara
WBGene00226798Brugia malayiFrom_analysisWormBase-Compara
WBGene00230701Brugia malayiFrom_analysisWormBase-Compara
WBGene00020920Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00122571Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00237385Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00238265Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246807Onchocerca volvulusFrom_analysisWormBase-Compara
CSP26.g11443Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g10582Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP32.g163Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g7941Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g17630Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cnig_chr_X.g24351Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_X.g24355Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold626.g6590Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00027.g1536Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_00475Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_024459Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g14554Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g11610Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g18453Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0235510Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00051638Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrX_pilon.g19106Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00291387Trichuris murisFrom_analysisWormBase-Compara
WBGene00296004Trichuris murisFrom_analysisWormBase-Compara
WBGene00302914Trichuris murisFrom_analysisWormBase-Compara
Paralog (21)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: SET domain. Is an ortholog of C. elegans set-20.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA20254
Corresponding_transcriptPPA20254.1
Experimental_infoMicroarray_resultsGPL14372_Probes_23894
GPL14372_Probes_23895
GPL14372_Probes_23896
GPL14372_Probes_23897
GPL14372_Probes_23898
MethodGene