WormBase Tree Display for Gene: WBGene00119377

WBGene00119377 SMap: S_parent: Sequence: Cjap.Contig16391
  Identity: Version: 2
    Name: CGC_name: Cjp-dpy-4 From_analysis: Inferred_from_orthology
      Sequence_name: CJA00173
      Molecular_name: CJA00173
        CJA00173.1
        JA44511
      Public_name: Cjp-dpy-4
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:19 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-dpy-4
        2 29 Jul 2011 11:13:36 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dpy
    RNASeq_FPKM: WBls:0000004 5.08956 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 227.393 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 2416.22 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
        2435.29 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        2454.36 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
      WBls:0000041 18.3806 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        198.914 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        205.102 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        206.27 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        32.4585 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        45.3931 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        54.9506 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        6.27535 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        64.5082 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        97.1627 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
      WBls:0000101 452.336 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
        64.5082 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
    GO_annotation: 00186705
    Ortholog: WBGene00001066 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00034489 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00070049 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00227669 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g11381 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g5525 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g5160 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g7596 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g7890 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g21592 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g610 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g2837 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g530 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g11123 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_28804.g27678 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-dpy-4 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g9731 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00578.g13098 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_012757 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_40278800 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00114375 Pristionchus pacificus From_analysis: WormBase-Compara
      chrIV_pilon.g12564 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00240733 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00272749 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00280924 Pristionchus pacificus From_analysis: WormBase-Compara
    Paralog (183)
    Structured_description: Automated_description: Predicted to be a structural constituent of cuticle. Is an ortholog of C. elegans dpy-4. In C. elegans, dpy-4 is involved in cuticle development involved in collagen and cuticulin-based cuticle molting cycle. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA00173
    Corresponding_transcript: CJA00173.1
    Other_sequence (129)
  Experimental_info: Expr_pattern: Expr1084129
    Microarray_results: GPL14145_CJA00173_109-168_0.593_5_A
  Method: Gene