WormBase Tree Display for Gene: WBGene00120381

WBGene00120381 SMap: S_parent: Sequence: Cjap.Contig18210
  Identity: Version: 2
    Name: CGC_name: Cjp-bcat-1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA01177
      Molecular_name: CJA01177
        CJA01177.1
        JA17304
      Public_name: Cjp-bcat-1
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:20 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-bcat-1
        2 29 Jul 2011 11:13:36 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: bcat
    RNASeq_FPKM: WBls:0000004 81.5449 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 255.208 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 139.928 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        151.893 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        163.859 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 100.151 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        103.037 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        113.979 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        125.224 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        62.2349 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        71.7865 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        78.0164 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        79.0845 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        89.6178 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        91.6892 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
      WBls:0000101 100.151 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        105.696 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00187538
      00187539
      00187540
    Ortholog: WBGene00001149 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00023554 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00051181 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00109249 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00115639 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00140799 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00225000 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g3162 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g2361 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g9547 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g13132 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g17742 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g4453 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g21400 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g10174 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g20520 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g29792 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g945 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00020.g1263 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-bcat-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g18830 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00213.g7182 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_00533.g12543 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_00006 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_024931 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g12206 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g11370 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0219600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g20322 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00241255 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00273300 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00265252 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00267566 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00286298 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00130899 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable branched-chain-amino-acid transaminase activity. Predicted to be involved in branched-chain amino acid metabolic process. Is an ortholog of C. elegans bcat-1. In C. elegans, bcat-1 is involved in branched-chain amino acid catabolic process; embryo development; and nematode larval development. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA01177
    Corresponding_transcript: CJA01177.1
    Other_sequence (75)
  Experimental_info: Expr_pattern: Expr1084389
    Microarray_results: GPL14145_CJA01177_1076-1135_0.966_1_B
      GPL14145_CJA01177_791-850_0.934_14_C
      GPL14145_CJA01177_961-1020_0.927_16_A
  Method: Gene