WormBase Tree Display for Gene: WBGene00129790

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WBGene00129790	SMap	S_parent	Sequence	Cjap.Contig17312
	Identity	Version	2
		Name	CGC_name	Cjp-hel-1	From_analysis	Inferred_from_orthology
			Sequence_name	CJA10586
			Molecular_name	CJA10586a
				CJA10586a.1
				JA09467
				CJA10586b
				JA45200
				CJA10586b.1
			Public_name	Cjp-hel-1
		Species	Caenorhabditis japonica
		History	Version_change	1	29 Aug 2008 14:34:22	WBPerson4055	Event	Imported	from NGASP
							Name_change	CGC_name	Cjp-hel-1
				2	29 Jul 2011 11:13:37	WBPerson4055	Event	Imported	Augustus import
		Status	Live
	Gene_info	Biotype	SO:0001217
		Gene_class	hel
		RNASeq_FPKM	WBls:0000004	688.96	From_analysis	RNASeq.japonica.WBls:0000004.control_mean
						RNASeq.japonica.WBls:0000004.control_median
						RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
			WBls:0000027	356.908	From_analysis	RNASeq.japonica.WBls:0000027.control_mean
						RNASeq.japonica.WBls:0000027.control_median
						RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
			WBls:0000038	262.671	From_analysis	RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
				268.862	From_analysis	RNASeq.japonica.WBls:0000038.control_mean
						RNASeq.japonica.WBls:0000038.control_median
				275.054	From_analysis	RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
			WBls:0000041	224.535	From_analysis	RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
				230.762	From_analysis	RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
				234.465	From_analysis	RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
				265.7	From_analysis	RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
				363.267	From_analysis	RNASeq.japonica.WBls:0000041.control_median
				377.529	From_analysis	RNASeq.japonica.WBls:0000041.control_mean
				460.833	From_analysis	RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
				517.872	From_analysis	RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
				536.729	From_analysis	RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
				549.337	From_analysis	RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
			WBls:0000101	275.054	From_analysis	RNASeq.japonica.total_over_all_stages.control_median
				354.141	From_analysis	RNASeq.japonica.total_over_all_stages.control_mean
		GO_annotation	00195104
			00195105
			00195106
		Ortholog	WBGene00001840	Caenorhabditis elegans	From_analysis	Inparanoid_8
						WormBase-Compara
			WBGene00024046	Caenorhabditis briggsae	From_analysis	Inparanoid_8
						WormBase-Compara
			WBGene00053875	Caenorhabditis remanei	From_analysis	TreeFam
						Inparanoid_8
						WormBase-Compara
			WBGene00146049	Caenorhabditis brenneri	From_analysis	TreeFam
						Inparanoid_8
						WormBase-Compara
			WBGene00233959	Brugia malayi	From_analysis	WormBase-Compara
			CBOVI.g7450	Caenorhabditis bovis	From_analysis	WormBase-Compara
			CSP21.g13672	Caenorhabditis parvicauda	From_analysis	WormBase-Compara
			CSP26.g4268	Caenorhabditis zanzibari	From_analysis	WormBase-Compara
			CSP28.g16997	Caenorhabditis panamensis	From_analysis	WormBase-Compara
			CSP29.g21833	Caenorhabditis becei	From_analysis	WormBase-Compara
			CSP31.g16828	Caenorhabditis uteleia	From_analysis	WormBase-Compara
			CSP32.g2021	Caenorhabditis sulstoni	From_analysis	WormBase-Compara
			CSP38.g9284	Caenorhabditis quiockensis	From_analysis	WormBase-Compara
			CSP39.g1596	Caenorhabditis waitukubuli	From_analysis	WormBase-Compara
			CSP40.g19375	Caenorhabditis tribulationis	From_analysis	WormBase-Compara
			Cang_2012_03_13_24356.g27152	Caenorhabditis angaria	From_analysis	WormBase-Compara
			Cni-hel-1	Caenorhabditis nigoni	From_analysis	WormBase-Compara
			Csp11.Scaffold630.g17447	Caenorhabditis tropicalis	From_analysis	WormBase-Compara
			Csp5_scaffold_00124.g4982	Caenorhabditis sinica	From_analysis	WormBase-Compara
			FL83_08698	Caenorhabditis latens	From_analysis	WormBase-Compara
			GCK72_004999	Caenorhabditis remanei	From_analysis	WormBase-Compara
			OTIPU.nOt.2.0.1.g01174	Oscheius tipulae	From_analysis	WormBase-Compara
			Pan_g7386	Panagrellus redivivus	From_analysis	WormBase-Compara
			Sp34_20136400	Caenorhabditis inopinata	From_analysis	WormBase-Compara
			WBGene00112028	Pristionchus pacificus	From_analysis	WormBase-Compara
			chrII_pilon.g5219	Caenorhabditis elegans	From_analysis	WormBase-Compara
			WBGene00240547	Onchocerca volvulus	From_analysis	WormBase-Compara
			WBGene00258061	Strongyloides ratti	From_analysis	WormBase-Compara
			WBGene00293399	Trichuris muris	From_analysis	WormBase-Compara
		Paralog (54)
		Structured_description	Automated_description	Predicted to enable ATP binding activity; nucleic acid binding activity; and oxidoreductase activity. Is an ortholog of C. elegans hel-1. In C. elegans, hel-1 is involved in determination of adult lifespan; nuclear mRNA surveillance; and positive regulation of gene expression.	Paper_evidence	WBPaper00065943
					Curator_confirmed	WBPerson324
						WBPerson37462
					Inferred_automatically	This description was generated automatically by a script based on data from the WS291 version of WormBase
					Date_last_updated	29 Nov 2023 00:00:00
	Molecular_info	Corresponding_CDS	CJA10586a
			CJA10586b
		Corresponding_transcript	CJA10586a.1
			CJA10586b.1
		Other_sequence (241)
	Experimental_info	Expr_pattern	Expr1088587
		Microarray_results	GPL14145_CJA10586_1091-1150_0.911_13_B
			GPL14145_CJA10586_1229-1288_0.951_1_A
			GPL14145_CJA10586_976-1035_0.935_3_C
	Method	Gene