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WormBase Tree Display for Gene: WBGene00133897

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Name Class

WBGene00133897SMapS_parentSequenceCjap.Contig18027
IdentityVersion3
NameSequence_nameCJA14693
Molecular_nameCJA14693
CJA14693.1
JA25926
Public_nameCJA14693
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:22WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCjp-unc-49
229 Jul 2011 11:13:38WBPerson4055EventImportedAugustus import
320 Mar 2018 10:26:13WBPerson4025Name_changeCGC_nameRemoved
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000048.18278From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002715.8594From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000386.59316From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
6.71085From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
6.82854From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
WBls:000004110.6333From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
13.5147From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
3.06116From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
3.18817From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
3.75903From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
4.0793From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
4.09085From_analysisRNASeq.japonica.WBls:0000041.control_median
4.1024From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
6.39494From_analysisRNASeq.japonica.WBls:0000041.control_mean
8.82149From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
WBls:00001016.59316From_analysisRNASeq.japonica.total_over_all_stages.control_median
6.81719From_analysisRNASeq.japonica.total_over_all_stages.control_mean
GO_annotation00198347
00198348
00198349
00198350
00198351
OrthologWBGene00055768Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00037805Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00006784Caenorhabditis elegansFrom_analysisWormBase-Compara
CBOVI.g4076Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g2958Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g4857Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g9434Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15298Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g14166Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g2620Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g13596Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP40.g436Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_12910.g23984Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_III.g9603Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold628.g7353Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00128.g5094Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_11418Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_010455Caenorhabditis remaneiFrom_analysisWormBase-Compara
Sp34_30124910Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00055771Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00113693Pristionchus pacificusFrom_analysisWormBase-Compara
chrIII_pilon.g8886Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00263154Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00287048Trichuris murisFrom_analysisWormBase-Compara
Paralog (118)
Structured_descriptionAutomated_descriptionPredicted to enable monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_info (3)
Experimental_infoExpr_patternExpr1091995
Microarray_results (3)
Remark[180319 gw3] The CGC name Cjp-unc-49 was deleted as there was no evidence to support it. This name has correctly been assigned to WBGene00130247Curator_confirmedWBPerson4025
MethodGene