WormBase Tree Display for Gene: WBGene00138003

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WBGene00138003	SMap	S_parent	Sequence	Cjap.Contig14111
	Identity	Version	3
		Name	CGC_name	Cjp-symk-1	From_analysis	Inferred_from_orthology
			Sequence_name	CJA18799
			Molecular_name	CJA18799
				CJA18799.1
				JA48267
			Public_name	Cjp-symk-1
		Species	Caenorhabditis japonica
		History	Version_change	1	29 Aug 2008 14:34:23	WBPerson4055	Event	Imported	NGASP import
				2	27 Jan 2009 12:59:26	WBPerson4055	Name_change	CGC_name	Cjp-symk-1
				3	29 Jul 2011 11:13:38	WBPerson4055	Event	Imported	Augustus import
		Status	Live
	Gene_info	Biotype	SO:0001217
		Gene_class	symk
		RNASeq_FPKM	WBls:0000004	16.7148	From_analysis	RNASeq.japonica.WBls:0000004.control_mean
						RNASeq.japonica.WBls:0000004.control_median
						RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
			WBls:0000027	11.3324	From_analysis	RNASeq.japonica.WBls:0000027.control_mean
						RNASeq.japonica.WBls:0000027.control_median
						RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
			WBls:0000038	10.4435	From_analysis	RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
				10.7411	From_analysis	RNASeq.japonica.WBls:0000038.control_mean
						RNASeq.japonica.WBls:0000038.control_median
				11.0387	From_analysis	RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
			WBls:0000041	14.3571	From_analysis	RNASeq.japonica.WBls:0000041.control_median
				15.0301	From_analysis	RNASeq.japonica.WBls:0000041.control_mean
				20.2206	From_analysis	RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
				21.3102	From_analysis	RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
				23.0124	From_analysis	RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
				23.7097	From_analysis	RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
				7.50419	From_analysis	RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
				7.75422	From_analysis	RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
				8.23567	From_analysis	RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
				8.49359	From_analysis	RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
			WBls:0000101	11.0387	From_analysis	RNASeq.japonica.total_over_all_stages.control_median
				13.0592	From_analysis	RNASeq.japonica.total_over_all_stages.control_mean
		Ortholog	WBGene00017797	Caenorhabditis elegans	From_analysis	TreeFam
						Inparanoid_8
						WormBase-Compara
			WBGene00024718	Caenorhabditis briggsae	From_analysis	Inparanoid_8
						WormBase-Compara
			WBGene00053119	Caenorhabditis remanei	From_analysis	TreeFam
						Inparanoid_8
						WormBase-Compara
			WBGene00147124	Caenorhabditis brenneri	From_analysis	TreeFam
						Inparanoid_8
						WormBase-Compara
			WBGene00191020	Caenorhabditis brenneri	From_analysis	TreeFam
						Inparanoid_8
						WormBase-Compara
			WBGene00223840	Brugia malayi	From_analysis	WormBase-Compara
			CBOVI.g70	Caenorhabditis bovis	From_analysis	WormBase-Compara
			CSP21.g1568	Caenorhabditis parvicauda	From_analysis	WormBase-Compara
			CSP26.g20875	Caenorhabditis zanzibari	From_analysis	WormBase-Compara
			CSP28.g2091	Caenorhabditis panamensis	From_analysis	WormBase-Compara
			CSP29.g9998	Caenorhabditis becei	From_analysis	WormBase-Compara
			CSP31.g3514	Caenorhabditis uteleia	From_analysis	WormBase-Compara
			CSP38.g12812	Caenorhabditis quiockensis	From_analysis	WormBase-Compara
			CSP39.g4	Caenorhabditis waitukubuli	From_analysis	WormBase-Compara
			CSP40.g2817	Caenorhabditis tribulationis	From_analysis	WormBase-Compara
			Cang_2012_03_13_00663.g13270	Caenorhabditis angaria	From_analysis	WormBase-Compara
			Cang_2012_03_13_00663.g13271	Caenorhabditis angaria	From_analysis	WormBase-Compara
			Cang_2012_03_13_00663.g13272	Caenorhabditis angaria	From_analysis	WormBase-Compara
			Cni-symk-1	Caenorhabditis nigoni	From_analysis	WormBase-Compara
			Csp11.Scaffold613.g5948	Caenorhabditis tropicalis	From_analysis	WormBase-Compara
			Csp5_scaffold_01451.g20999	Caenorhabditis sinica	From_analysis	WormBase-Compara
			GCK72_018881	Caenorhabditis remanei	From_analysis	WormBase-Compara
			Pan_g13211	Panagrellus redivivus	From_analysis	WormBase-Compara
			Pan_g13212	Panagrellus redivivus	From_analysis	WormBase-Compara
			Sp34_50116300	Caenorhabditis inopinata	From_analysis	WormBase-Compara
			chrV_pilon.g15021	Caenorhabditis elegans	From_analysis	WormBase-Compara
			WBGene00243883	Onchocerca volvulus	From_analysis	WormBase-Compara
			WBGene00276162	Pristionchus pacificus	From_analysis	WormBase-Compara
			WBGene00297871	Trichuris muris	From_analysis	WormBase-Compara
			WBGene00300757	Trichuris muris	From_analysis	WormBase-Compara
		Structured_description	Automated_description	Is predicted to encode a protein with the following domains: Symplekin tight junction protein C terminal; Symplekin C-terminal; Armadillo-like helical; Symplekin/PTA1 N-terminal; Symplekin/Pta1, N-terminal; and Symplekin/Pta1. Is an ortholog of C. elegans symk-1.	Paper_evidence	WBPaper00065943
					Curator_confirmed	WBPerson324
						WBPerson37462
					Inferred_automatically	This description was generated automatically by a script based on data from the WS291 version of WormBase
					Date_last_updated	29 Nov 2023 00:00:00
	Molecular_info	Corresponding_CDS	CJA18799
		Corresponding_transcript	CJA18799.1
		Other_sequence	HGC02771_1
			HG00857
			JI163985.1
			CRC10704_1
			Hbac_isotig06748
			CBC13445_1
	Experimental_info	Expr_pattern	Expr1079474
		Microarray_results	GPL14145_CJA18799_2537-2596_0.463_726_B
			GPL14145_CJA18799_2672-2731_0.821_63_A
			GPL14145_CJA18799_2867-2926_0.895_13_C
	Method	Gene