WormBase Tree Display for Gene: WBGene00148642

WBGene00148642 SMap: S_parent: Sequence: Cbre_Contig73
  Identity: Version: 1
    Name: CGC_name: Cbn-polh-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN09917
      Molecular_name: CBN09917
        CBN09917.1
        CN19450
      Other_name: CBN09917
      Public_name: Cbn-polh-1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 30 Oct 2008 10:39:28 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cbn-polh-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: polh
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 11.2497 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        5.62485 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        6.00955 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        6.35188 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        7.06174 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        7.17975 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        7.71525 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
      WBls:0000038 5.28054 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        5.53423 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        5.78792 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (15)
      WBls:0000101 4.09144 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        5.88523 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00210223
      00210224
    Ortholog: WBGene00018721 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00032820 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00069031 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00132091 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g6074 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g4263 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g11089 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g8471 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g11265 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g6234 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g9672 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g4389 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g22177 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g9129 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g9131 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g4534 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00012.g909 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-polh-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g14346 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_06231.g36256 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_08919 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_011596 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g08013 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_30307400 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00224542 Brugia malayi From_analysis: WormBase-Compara
      chrIII_pilon.g7026 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00244359 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00304440 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00259982 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00287309 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00156633 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00162224 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00193461 Caenorhabditis brenneri From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable damaged DNA binding activity. Predicted to be involved in DNA repair. Is an ortholog of C. elegans polh-1. In C. elegans, polh-1 is involved in several processes, including embryo development; error-prone translesion synthesis; and negative regulation of mitotic DNA damage checkpoint. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN09917
    Corresponding_transcript: CBN09917.1
    Other_sequence: Acan_isotig10916
      PPC16171_1
      ACC12889_1
      EY462140.1
      JI169808.1
      Dviv_isotig24248
  Experimental_info: Microarray_results: GPL14142_CBN09917_208-267_0.813_93_A
      GPL14142_CBN09917_325-384_0.861_42_B
      GPL14142_CBN09917_1081-1140_0.691_202_C
  Method: Gene