WormBase Tree Display for Gene: WBGene00155085

WBGene00155085 SMap: S_parent: Sequence: Cbre_Contig6
  Identity: Version: 2
    Name: CGC_name: Cbn-tspo-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN16360
      Molecular_name: CBN16360
        CBN16360.1
        CN24243
      Public_name: Cbn-tspo-1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:51 WBPerson4055 Event: Imported: from NGASP
        2 28 May 2021 19:05:19 WBPerson1983 Name_change: CGC_name: Cbn-tspo-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tspo
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 102.384 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        1110.15 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        606.267 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
      WBls:0000024 102.961 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        116.379 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        62.1478 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        65.5284 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        99.5243 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
      WBls:0000038 70.8793 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        76.2878 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        81.6962 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (18)
      WBls:0000101 143.517 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
        89.0735 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
    GO_annotation: 00215365
    Ortholog: WBGene00042588 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00077771 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00085828 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00112622 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00209561 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g9757 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g1160 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g19113 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g20989 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g4818 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g9794 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g8294 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g11687 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g5142 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      Cni-C41G7.9 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g14898 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00089.g3928 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_000461 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g06363 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g11534 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10070710 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g1828 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00238490 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00238493 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00294506 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00139553 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00144475 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00150612 Caenorhabditis brenneri From_analysis: TreeFam
    Structured_description: Automated_description: Predicted to be located in membrane. Is an ortholog of C. elegans tspo-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN16360
    Corresponding_transcript: CBN16360.1
    Other_sequence (76)
  Method: Gene