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WormBase Tree Display for Gene: WBGene00155979

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Name Class

WBGene00155979SMapS_parentSequenceCbre_Contig100
IdentityVersion2
NameCGC_nameCbn-pygl-1From_analysisInferred_from_orthology
Sequence_nameCBN17254
Molecular_nameCBN17254
CBN17254.1
CN15054
Public_nameCbn-pygl-1
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:51WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCbn-pygl-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpygl
RNASeq_FPKMWBls:0000002 (11)
WBls:000000411.8293From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
5.91465From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
31.0182From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
39.3811From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
53.3836From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
55.3687From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
60.4612From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
WBls:0000038108.572From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
109.11From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
109.648From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:0000041 (17)
WBls:000010155.7824From_analysisRNASeq.brenneri.total_over_all_stages.control_median
72.2981From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00216119
00216120
00216121
00216122
OrthologWBGene00020696Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00024571Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00056723Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00090588Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00123527Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g1411Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g580Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g1382Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g19625Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g18939Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g1495Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g9516Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g13644Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g18164Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g29402Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g1304Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00645.g13100Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-T22F3.3Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g12902Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00436.g11347Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_02685Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_020052Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g00791Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g13371Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g17818Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g2621Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g4229Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50009600Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00226192Brugia malayiFrom_analysisWormBase-Compara
chrV_pilon.g13789Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00242906Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00276161Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00258456Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00258759Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00264637Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00290232Trichuris murisFrom_analysisWormBase-Compara
WBGene00301839Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00144169Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable glycogen phosphorylase activity and pyridoxal phosphate binding activity. Predicted to be involved in carbohydrate metabolic process. Is an ortholog of C. elegans pygl-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN17254
Corresponding_transcriptCBN17254.1
Other_sequence (118)
Experimental_infoMicroarray_resultsGPL14142_CBN05444_1729-1788_0.910_3_A
GPL14142_CBN05444_1771-1830_0.894_10_B
GPL14142_CBN05444_2026-2085_0.813_52_C
MethodGene