WormBase Tree Display for Gene: WBGene00162088

WBGene00162088 SMap: S_parent: Sequence: Cbre_Contig594
  Identity: Version: 2
    Name: CGC_name: Cbn-timp-1.2 From_analysis: Inferred_from_orthology
      Sequence_name: CBN23363
      Molecular_name: CBN23363
        CBN23363.1
        CN14047
      Public_name: Cbn-timp-1.2
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:52 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Cbn-timp-1.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: timp
    RNASeq_FPKM: WBls:0000002 0.280747 From_analysis: RNASeq.brenneri.WBls:0000002.control_mean
        0.904342 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
        1.90313 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
            RNASeq.brenneri.WBls:0000002.control_median
      WBls:0000004 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
            RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
            RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
            RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        2.8188 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        3.38726 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        5.21748 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        6.27375 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
      WBls:0000038 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
            RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
            RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
      WBls:0000041 11.2384 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
        1.65989 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
        1.77151 From_analysis: RNASeq.brenneri.WBls:0000041.control_mean
        0 From_analysis (12)
        2.44446 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
        5.55909 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
        7.44233 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
      WBls:0000101 1.00489 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
        0 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
    GO_annotation: 00221115
    Ortholog: WBGene00019476 Caenorhabditis elegans From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00032459 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00053028 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00091580 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00095448 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
      WBGene00111644 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00211201 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      CBOVI.g1005 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g17604 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g4050 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g17022 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g19868 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g19871 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g16981 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g9886 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g26296 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g4395 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g11942 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00898.g14820 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-K07C11.3 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g22212 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00277.g8538 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_03628 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_018785 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_50105600 Caenorhabditis inopinata From_analysis: WormBase-Compara
    Paralog: WBGene00153269 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable metalloendopeptidase inhibitor activity. Is an ortholog of C. elegans timp-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN23363
    Corresponding_transcript: CBN23363.1
    Other_sequence: CJC14055_1
  Experimental_info: Microarray_results: GPL14142_CBN14544_251-310_0.914_5_A
  Method: Gene