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WormBase Tree Display for Gene: WBGene00162698

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Name Class

WBGene00162698SMapS_parentSequenceCbre_Contig911
IdentityVersion1
NameSequence_nameCBN23973
Molecular_nameCBN23973
CBN23973.1
CN03537
Public_nameCBN23973
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:52WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000021.7316From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
2.11839From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
2.35297From_analysisRNASeq.brenneri.WBls:0000002.control_median
2.36055From_analysisRNASeq.brenneri.WBls:0000002.control_mean
2.58756From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
3.44146From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
4.02856From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
4.61091From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
5.08699From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
WBls:00000040.72244From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
1.44488From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
3.0741From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
4.67478From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
4.93818From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
4.94801From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
6.11772From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
WBls:00000380.516057From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
1.89362From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
3.27118From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:0000041 (11)
WBls:00001010.742116From_analysisRNASeq.brenneri.total_over_all_stages.control_median
1.45702From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00221595
00221596
00221597
00221598
00221599
00221600
00221601
00221602
OrthologWBGene00073930Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00075572Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00075657Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
CBOVI.g8215Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g6216Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g15234Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g13834Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g6951Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g17508Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g14415Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g21933Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g4031Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g2371Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00122.g4968Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-lev-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold589.g5075Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00041.g2209Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_19446Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_014510Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g00827Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g10915Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g13480Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_40143400Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00002974Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00025000Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00062740Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00079796Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00093792Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00129165Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00134642Caenorhabditis japonicaFrom_analysisWormBase-Compara
chrIV_pilon.g12237Caenorhabditis elegansFrom_analysisWormBase-Compara
Paralog (128)
Structured_descriptionAutomated_descriptionPredicted to enable acetylcholine-gated monoatomic cation-selective channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in postsynaptic membrane. Is an ortholog of C. elegans lev-1. In C. elegans, lev-1 is involved in regulation of egg-laying behavior; regulation of locomotion; and transmembrane transport.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN23973
Corresponding_transcriptCBN23973.1
Other_sequenceGU060987.1
PPC18932_1
MJ02094
MHC01205_1
GU061002.1
MH01542
EU006792.1
GU060995.1
Experimental_infoMicroarray_resultsGPL14142_CBN23973_429-488_0.948_1_A
MethodGene