WormBase Tree Display for Gene: WBGene00194710

WBGene00194710 SMap: S_parent: Sequence: C30B5
  Identity: Version: 2
    Name: CGC_name: mks-2 Person_evidence: WBPerson2136
      Sequence_name: C30B5.9
      Molecular_name: C30B5.9
        C30B5.9.1
        CE45825
      Other_name: CELE_C30B5.9 Accession_evidence: NDB BX284602
      Public_name: mks-2
    DB_info: Database: WormFlux gene WBGene00194710
        NDB locus_tag CELE_C30B5.9
        Panther gene CAEEL|WormBase=WBGene00194710|UniProtKB=C8JQP7
          family PTHR13531
        NCBI gene 13185304
        RefSeq protein NM_001267179.4
        TrEMBL UniProtAcc C8JQP7
        UniProt_GCRP UniProtAcc C8JQP7
        OMIM gene 613277
    Species: Caenorhabditis elegans
    History: Version_change: 1 11 Aug 2009 12:32:47 WBPerson1867 Event: Created
        2 20 Dec 2011 16:46:04 WBPerson2970 Name_change: CGC_name: mks-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mks
    Allele (12)
    RNASeq_FPKM (74)
    GO_annotation: 00007025
      00007026
      00007027
      00007028
      00007029
      00007030
      00007031
    Ortholog: WBGene00084816 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00207244 Caenorhabditis japonica From_analysis: Inparanoid_8
      WBGene00025620 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00270454 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00222742 Brugia malayi From_analysis: WormBase-Compara
      CSP26.g13849 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g13850 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g15246 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g12510 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g18700 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g1635 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g1880 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g2214 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g22183 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g8601 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g8602 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-C30B5.6 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cni-mks-2 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g11622 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00245.g7865 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_00245.g7866 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_04487 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_006196 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_006197 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g12940 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_20127900 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00054025 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00106668 Pristionchus pacificus From_analysis: WormBase-Compara
      chrII_pilon.g4709 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00292588 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0037614 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
            Panther
      FB:FBgn0037615 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
            Panther
      ZFIN:ZDB-GENE-100818-1 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      HGNC:25018 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      HGNC:27453 Homo sapiens From_analysis: Hieranoid
            Inparanoid
            OrthoFinder
            Panther
            PhylomeDB
      MGI:1920020 Mus musculus From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      MGI:1918698 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            Panther
            PhylomeDB
      RGD:1308399 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            Panther
            PhylomeDB
      RGD:1304607 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
    Paralog: WBGene00022733 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Automated_description: Involved in non-motile cilium assembly and protein localization to ciliary transition zone. Located in ciliary transition zone. Human ortholog(s) of this gene implicated in Joubert syndrome 2 and Meckel syndrome 2. Is an ortholog of human TMEM216 (transmembrane protein 216). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0110988 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:25018)
      DOID:0070116 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:25018)
      DOID:0050777 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:25018)
  Molecular_info (4)
  Experimental_info: Expr_pattern: Expr1145552
      Expr2013583
      Expr2031816
    Microarray_results: 181850_at
      Aff_C30B5.6
      GPL19516_CGZ0006717
      GPL21109_C30B5.9
    Expression_cluster (91)
  Map_info: Map: II Position: -0.400561
    Positive: Positive_clone: C30B5 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00040522
    WBPaper00046659
    WBPaper00048909
    WBPaper00049218
    WBPaper00049372
    WBPaper00052057
    WBPaper00053681
    WBPaper00055090
    WBPaper00060708
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene