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WormBase Tree Display for Gene: WBGene00257408

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Name Class

WBGene00257408SMapS_parentSequenceSRAE_chr1
IdentityVersion1
NameSequence_nameSRAE_1000080800
Molecular_nameSRAE_1000080800
SRAE_1000080800.1
SRP11192
Other_nameSR02472Person_evidenceWBPerson2951
Public_nameSRAE_1000080800
SpeciesStrongyloides ratti
HistoryVersion_change101 May 2015 10:45:53WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:0000677101.315From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
106.84From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
107.97From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
95.1847From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
95.6684From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
98.219From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
WBls:000067826.5487From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
32.0098From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
52.0003From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
52.6773From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
54.9151From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
54.9191From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
68.2785From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
69.9563From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
WBls:0000680160.293From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:0000682158.235From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
OrthologWBGene00147590Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00035121Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00223627Brugia malayiFrom_analysisWormBase-Compara
WBGene00006826Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00126453Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00240293Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00114092Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00051653Caenorhabditis remaneiFrom_analysisWormBase-Compara
CBOVI.g3265Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10020Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g746Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g10565Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g2535Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g9089Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g150Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g20190Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g13808Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g17641Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00195.g6739Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-97Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold626.g6604Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00309.g9167Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_00487Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_024445Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g12283Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g5931Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0237200Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g19093Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00292255Trichuris murisFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Zinc finger, LIM-type; LIM domain; and LIM and senescent cell antigen-like-containing domain protein 1-like. Is an ortholog of C. elegans unc-97. In C. elegans, unc-97 is involved in several processes, including muscle cell cellular homeostasis; positive regulation of sarcomere organization; and sensory perception of mechanical stimulus.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSSRAE_1000080800
Corresponding_transcriptSRAE_1000080800.1
Other_sequence (57)
Experimental_infoExpression_clusterWBPaper00050919:up_infective-L3_vs_parasitic_mRNA
MethodGene