Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00261245

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00261245SMapS_parentSequenceSRAE_chr2
IdentityVersion1
NameSequence_nameSRAE_2000104500
Molecular_nameSRAE_2000104500
SRAE_2000104500.1
SRP10653
Public_nameSRAE_2000104500
SpeciesStrongyloides ratti
HistoryVersion_change101 May 2015 10:45:53WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000067710.9829From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
11.4528From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
11.7569From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
11.9713From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
2.23555From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
2.52215From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
WBls:00006780.191561From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
0.267637From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
0.323367From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
0.376076From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
0.384132From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
0.486718From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
0.635786From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
0.864163From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
WBls:000068016.744From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:0000682226.187From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
GO_annotation00270283
OrthologWBGene00141266Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00142619Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00146182Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00151854Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00155668Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00157446Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00027584Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027591Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027592Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027593Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027594Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027595Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00225924Brugia malayiFrom_analysisWormBase-Compara
WBGene00000739Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000740Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000741Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000742Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000743Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000744Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000753Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00121014Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00132383Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00181822Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00207444Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00210432Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00211588Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00213834Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00214013Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00214323Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00096467Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00051527Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00051528Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00051529Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00051537Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00077806Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00077857Caenorhabditis remaneiFrom_analysisWormBase-Compara
CBOVI.g2546Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g2547Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g2548Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g2549Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g2550Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g2551Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g2553Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g2554Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g2556Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g2562Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g15165Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g15660Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g16835Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g17143Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g1945Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g8751Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g8752Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g17402Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g17403Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g17404Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g17405Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g2652Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g2659Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g2660Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g2661Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g26044Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g26562Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g26563Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g10635Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g10636Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g244Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g245Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g246Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g252Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g10361Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g13639Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g13640Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g8650Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g18254Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g20054Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g27147Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g15747Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g15748Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g15749Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g15755Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g15756Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00079.g3646Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00079.g3647Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_X.g24496Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_X.g24503Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_X.g24504Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_X.g24505Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_X.g24506Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_X.g24507Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold626.g6458Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold626.g6459Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold626.g6461Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold626.g6462Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold626.g6463Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold626.g6467Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_06097.g36057Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_00376Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_00383Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_024550Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_024557Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_024558Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_024559Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_024560Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_024562Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g00104Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g02475Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g4258Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0185210Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_X0185300Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_X0185400Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_X0185500Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_X0185600Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_X0185700Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_X0185800Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_X0185900Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_X0186000Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_X0227300Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g19204Caenorhabditis elegansFrom_analysisWormBase-Compara
chrX_pilon.g19210Caenorhabditis elegansFrom_analysisWormBase-Compara
chrX_pilon.g19211Caenorhabditis elegansFrom_analysisWormBase-Compara
chrX_pilon.g19212Caenorhabditis elegansFrom_analysisWormBase-Compara
chrX_pilon.g19213Caenorhabditis elegansFrom_analysisWormBase-Compara
chrX_pilon.g19214Caenorhabditis elegansFrom_analysisWormBase-Compara
chrX_pilon.g20119Caenorhabditis elegansFrom_analysisWormBase-Compara
Paralog (73)
Structured_descriptionAutomated_descriptionPredicted to be a structural constituent of cuticle. Is an ortholog of C. elegans col-167; col-166; and col-180.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSSRAE_2000104500
Corresponding_transcriptSRAE_2000104500.1
Other_sequence (182)
Experimental_infoExpression_clusterWBPaper00050919:down_parasitic_vs_free-living_mRNA
WBPaper00050919:up_infective-L3_vs_parasitic_mRNA
MethodGene