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WormBase Tree Display for Gene: WBGene00266910

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Name Class

WBGene00266910SMapS_parentSequenceSRAE_chrX_scaffold2
IdentityVersion1
NameSequence_nameSRAE_X000134200
Molecular_nameSRAE_X000134200
SRAE_X000134200.1
SRP08403
Public_nameSRAE_X000134200
SpeciesStrongyloides ratti
HistoryVersion_change101 May 2015 10:45:54WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000067710.585From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
11.9315From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
14.3192From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
14.9519From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
18.1664From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
18.1835From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
WBls:000067810.6134From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
2.15667From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
2.96052From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
7.09914From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
7.165From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
7.313From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
7.7031From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
9.41782From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
WBls:000068040.5091From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006822.59206From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
GO_annotation00277711
00277712
00277713
OrthologWBGene00154758Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00157643Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00025510Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029688Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00010700Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00132655Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00275245Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00058672Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00068648Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00081248Caenorhabditis remaneiFrom_analysisWormBase-Compara
CSP21.g9497Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g17218Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g20849Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g23091Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP32.g12562Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g9070Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g8900Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-nipi-3Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cni-zyg-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g11156Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00240.g7747Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_01807Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_013823Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_013831Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_025513Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g09209Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g7076Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0131100Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g20772Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00296153Trichuris murisFrom_analysisWormBase-Compara
WBGene00302389Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00257512Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00261553Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00266846Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00266894Strongyloides rattiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity and protein kinase activity. Is an ortholog of C. elegans nipi-3. In C. elegans, nipi-3 is involved in defense response to other organism and regulation of gene expression.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSSRAE_X000134200
Corresponding_transcriptSRAE_X000134200.1
Other_sequence (20)
Experimental_infoExpression_clusterWBPaper00050919:up_infective-L3_vs_free-living_mRNA
WBPaper00050919:up_infective-L3_vs_parasitic_mRNA
MethodGene