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WormBase Tree Display for Gene: WBGene00270427

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Name Class

WBGene00270427SMapS_parentSequencecb25.fpc0022b
IdentityVersion1
NameSequence_nameCBG30103
Molecular_nameCBG30103
CBG30103.1
CBP44346
Public_nameCBG30103
SpeciesCaenorhabditis briggsae
HistoryVersion_change131 Aug 2016 10:30:13WBPerson4025EventSplit_fromWBGene00024342
Split_fromWBGene00024342
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000215.7187From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
21.6791From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
23.0634From_analysisRNASeq.briggsae.WBls:0000002.control_mean
31.7925From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
25.5345From_analysisRNASeq.briggsae.WBls:0000002.control_mean
26.7358From_analysisRNASeq.briggsae.WBls:0000002.control_median
32.9476From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000327.8118From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
30.5364From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
33.2609From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
32.7405From_analysisRNASeq.briggsae.WBls:0000003.control_mean
37.1487From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000412.0835From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
13.6518From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
15.2202From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
10.5774From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
10.7791From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
11.6822From_analysisRNASeq.briggsae.WBls:0000004.control_mean
9.75065From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.766577From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
15.7456From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.81149From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
6.77456From_analysisRNASeq.briggsae.WBls:0000027.control_mean
12.5644From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
8.18795From_analysisRNASeq.briggsae.WBls:0000027.control_median
8.22202From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000358.23843From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.2362From_analysisRNASeq.briggsae.WBls:0000038.control_mean
10.4597From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
10.7084From_analysisRNASeq.briggsae.WBls:0000038.control_median
10.9571From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
16.0148From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.51337From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004120.9159From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
46.3368From_analysisRNASeq.briggsae.WBls:0000041.control_mean
54.1278From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
54.3671From_analysisRNASeq.briggsae.WBls:0000041.control_median
54.6064From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
55.6973From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
30.3739From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
35.1233From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
41.8074From_analysisRNASeq.briggsae.WBls:0000041.control_mean
44.6255From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006315.4807From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
18.7966From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
18.9437From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
22.4058From_analysisRNASeq.briggsae.WBls:0000063.control_mean
28.8639From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
29.9441From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
21.131From_analysisRNASeq.briggsae.WBls:0000063.control_median
22.5579From_analysisRNASeq.briggsae.WBls:0000063.control_mean
23.3183From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010115.7456From_analysisRNASeq.briggsae.total_over_all_stages.control_median
19.8897From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
15.8802From_analysisRNASeq.briggsae.total_over_all_stages.control_median
20.5102From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
OrthologWBGene00142352Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00153142Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00159531Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00160307Caenorhabditis brenneriFrom_analysisWormBase-Compara
CBOVI.g12791Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g9318Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g7749Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g7750Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g14713Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g14714Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g9023Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g9024Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g14988Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g14989Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g4986Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g4987Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g8524Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g24348Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g2512Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g22864Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g22865Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00386.g10110Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_II.g3989Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g3990Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g8910Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g8911Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01787.g23133Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_01787.g23134Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_08489Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_003646Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_003647Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01837Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g13853Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20184900Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_20185020Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00013139Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00067258Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00117567Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00120165Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00175030Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00227009Brugia malayiFrom_analysisWormBase-Compara
WBGene00246810Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00263838Strongyloides rattiFrom_analysisWormBase-Compara
chrII_pilon.g5574Caenorhabditis elegansFrom_analysisWormBase-Compara
chrII_pilon.g5575Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00024342Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: DTW and DTW domain. Is an ortholog of C. elegans Y53C12A.10 and Y53C12A.3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG30103
Corresponding_transcriptCBG30103.1
Other_sequencePPC13549_1
Acan_isotig19923
Tcol_isotig15256
ES412516.1
Dviv_isotig20146
HBC02731_1
Dviv_isotig20147
Hbac_isotig05248
Experimental_infoMicroarray_resultsGPL8303_CB6_WBGene00024342_A
GPL8303_CB6_WBGene00024342_B
MethodGene