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WormBase Tree Display for Gene: WBGene00277311

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Name Class

WBGene00277311SMapS_parentSequencePPA_ChrX
IdentityVersion1
NameSequence_namePPA38942
Molecular_namePPA38942
PPA38942.1
PP60719
Public_namePPA38942
SpeciesPristionchus pacificus
HistoryVersion_change124 Nov 2017 16:14:21WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00283642
00283643
OrthologWBGene00156694Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00034602Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00227415Brugia malayiFrom_analysisWormBase-Compara
WBGene00000544Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000546Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000547Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00119785Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00182716Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00236837Onchocerca volvulusFrom_analysisWormBase-Compara
CBOVI.g12001Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g2275Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g2277Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g4358Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g9207Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g15678Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g2631Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g22171Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g26804Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g26805Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g26806Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g26807Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g15835Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g6703Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g1769Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g2474Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00433.g10795Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_02490.g17246Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_11890.g23463Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_IV.g15887Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold588.g4937Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_02784.g27901Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_07846Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_015533Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g02780Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g11986Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g19408Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40007900Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00071972Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrIV_pilon.g9676Caenorhabditis elegansFrom_analysisWormBase-Compara
chrIV_pilon.g9677Caenorhabditis elegansFrom_analysisWormBase-Compara
chrI_pilon.g2395Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00290213Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00098664Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00101281Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00102417Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00104581Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00109362Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00109972Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00272039Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00272855Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00280481Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable calcium-dependent cysteine-type endopeptidase activity. Predicted to be involved in proteolysis. Is an ortholog of C. elegans clp-3; clp-6; and clp-7.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA38942
Corresponding_transcriptPPA38942.1
Experimental_infoMicroarray_resultsGPL14372_Probes_88460
MethodGene