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WormBase Tree Display for Gene: WBGene00279621

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Name Class

WBGene00279621SMapS_parentSequencePPA_ChrIV
IdentityVersion1
NameSequence_namePPA41252
Molecular_namePPA41252
PPA41252.1
PP67548
Public_namePPA41252
SpeciesPristionchus pacificus
HistoryVersion_change124 Nov 2017 16:14:22WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000322.88261From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010.96087From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
0From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00285227
00285228
00285229
00285230
OrthologWBGene00158389Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190084Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190479Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00032122Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038498Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00221359Brugia malayiFrom_analysisWormBase-Compara
WBGene00016975Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00017198Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00119884Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00240403Onchocerca volvulusFrom_analysisWormBase-Compara
CBOVI.g3220Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g770Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g771Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g772Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g7768Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g7769Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g8274Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g1488Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g22188Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g742Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g17469Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g4651Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g18132Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g2720Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g26170Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g26459Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g8128Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g18120Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g302Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g12503Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g15537Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g15538Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g22245Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g22246Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g4084Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g4085Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g4086Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g23325Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g9487Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g15682Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g15989Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00044.g2400Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00194.g6701Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00195.g6731Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00494.g11504Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00841.g14504Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-nhr-173Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_V.g20156Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold509.g2498Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold626.g6388Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00073.g3396Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00135.g5294Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_04527.g33147Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_04533.g33162Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_00316Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_017031Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_024622Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01219Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01221Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01222Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g06564Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08913Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g13476Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g14592Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g2361Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g2722Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g2723Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g896Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g897Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g898Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g899Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g900Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g901Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0192200Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00051459Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00064942Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00264482Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00265077Strongyloides rattiFrom_analysisWormBase-Compara
chrV_pilon.g15209Caenorhabditis elegansFrom_analysisWormBase-Compara
chrX_pilon.g19278Caenorhabditis elegansFrom_analysisWormBase-Compara
Paralog (62)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-173.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA41252
Corresponding_transcriptPPA41252.1
MethodGene