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WormBase Tree Display for Gene: WBGene00283457

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Name Class

WBGene00283457SMapS_parentSequencePPA_ChrII
IdentityVersion1
NameSequence_namePPA45088
Molecular_namePPA45088
PPA45088.1
PP23356
Public_namePPA45088
SpeciesPristionchus pacificus
HistoryVersion_change124 Nov 2017 16:14:22WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000329.94651From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
3.3155From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00286765
OrthologWBGene00158491Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00036227Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00231332Brugia malayiFrom_analysisWormBase-Compara
WBGene00000754Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00127593Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00247025Onchocerca volvulusFrom_analysisWormBase-Compara
CBOVI.g11816Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10144Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g189Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g17929Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g6156Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g15232Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g12111Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g13274Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g11562Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g26484Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g10880Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00835.g14483Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-col-181Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g13387Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00200.g6888Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_023244Caenorhabditis remaneiFrom_analysisWormBase-Compara
Sp34_X0049700Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00077263Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrX_pilon.g20189Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00291500Trichuris murisFrom_analysisWormBase-Compara
Paralog (148)
Structured_descriptionAutomated_descriptionPredicted to be a structural constituent of cuticle. Is an ortholog of C. elegans col-181.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA45088
Corresponding_transcriptPPA45088.1
Other_sequence (91)
Experimental_infoExpression_clusterWBPaper00061743:ppa-eud-1(tu1069)_regulated
WBPaper00064862:Ppa-sul-2(tu1069)_4M1_Up
WBPaper00064862:Ppa-sul-2(tu1069)_J4.12_Up
MethodGene