Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00304440

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00304440SMapS_parentSequencePPA_ChrIII
IdentityVersion4
NameCGC_namePpa-polh-1From_analysisInferred_from_orthology
Sequence_namePPA46661
Molecular_namePPA46661
PPA46661.1
PP74469
Public_namePpa-polh-1
SpeciesPristionchus pacificus
HistoryVersion_change121 Feb 2019 14:49:04WBPerson4055EventCreated
208 May 2019 10:09:25WBPerson1983Name_changeCGC_namePpa-polh-1
328 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
428 Jul 2021 11:12:29WBPerson1983Name_changeCGC_namePpa-polh-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpolh
RNASeq_FPKMWBls:00000327.05789From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010112.503From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
6.5203From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
7.05789From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
GO_annotation00302763
00302764
OrthologWBGene00148642Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00032820Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00224542Brugia malayiFrom_analysisWormBase-Compara
WBGene00018721Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00132091Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00244359Onchocerca volvulusFrom_analysisWormBase-Compara
CBOVI.g6074Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g4263Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g11089Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g8471Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g11265Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g6234Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g9672Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g4389Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g22177Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g9129Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g9131Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g4534Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00012.g909Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-polh-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g14346Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_06231.g36256Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_08919Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_011596Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08013Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_30307400Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00069031Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00259982Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00287309Trichuris murisFrom_analysisWormBase-Compara
chrIII_pilon.g7026Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00304477Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00304482Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00304702Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable damaged DNA binding activity. Predicted to be involved in DNA repair. Is an ortholog of C. elegans polh-1. In C. elegans, polh-1 is involved in several processes, including embryo development; error-prone translesion synthesis; and negative regulation of mitotic DNA damage checkpoint.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA46661
Corresponding_transcriptPPA46661.1
Other_sequencePPC16171_1
PPC16574_1
JI169808.1
Experimental_infoMicroarray_resultsGPL14372_Probes_66242
GPL14372_Probes_66244
Remark[210528 pad] The CGC name Ppa-polh-1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene