WormBase Tree Display for Gene: WBGene00001605
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WBGene00001605 | Evidence | CGC_data_submission | |||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | CHROMOSOME_III | ||||
Identity | Version | 2 | |||||
Name | CGC_name | gln-4 | |||||
Sequence_name | T25C8.3 | ||||||
Molecular_name | T25C8.3 | ||||||
Other_name | CELE_T25C8.3 | Accession_evidence | NDB | BX284603 | |||
Public_name | gln-4 | ||||||
DB_info | Database | AceView | gene | 3O688 | |||
WormQTL | gene | WBGene00001605 | |||||
NDB | locus_tag | CELE_T25C8.3 | |||||
NCBI | gene | 13191819 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0000336 | |||||
Gene_class | gln | ||||||
Allele (30) | |||||||
RNASeq_FPKM (74) | |||||||
Paralog | WBGene00001603 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | |||
Structured_description | Automated_description | Enriched in germ line and in male based on proteomic and RNA-seq studies. Is affected by several genes including daf-2; rrf-3; and eat-2 based on RNA-seq and microarray studies. Is affected by thirteen chemicals including methylmercuric chloride; manganese chloride; and stavudine based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS_history | T25C8.3:wp141 | |||||
Corresponding_pseudogene | T25C8.3 | ||||||
Other_sequence | Oden_isotig23586 | ||||||
GR14296 | |||||||
ASC32126_1 | |||||||
Tcir_isotig02490 | |||||||
HC02771 | |||||||
AE00568 | |||||||
NBC03854_1 | |||||||
FG619813.1 | |||||||
ACC06900_1 | |||||||
HCC00354_1 | |||||||
Hbac_isotig01600 | |||||||
CR00021 | |||||||
EX538051.1 | |||||||
ES414263.1 | |||||||
ES409855.1 | |||||||
GRC00463_1 | |||||||
EX543970.1 | |||||||
FE909904.1 | |||||||
AS14818 | |||||||
TX00489 | |||||||
Dviv_isotig10537 | |||||||
Dviv_isotig10538 | |||||||
Tcol_isotig18295 | |||||||
CR00035 | |||||||
GW406767.1 | |||||||
ES410658.1 | |||||||
EX008195.1 | |||||||
GW406818.1 | |||||||
ES410439.1 | |||||||
PSC02383_1 | |||||||
EV849998.1 | |||||||
DA03578 | |||||||
EX012621.1 | |||||||
Acan_isotig03612 | |||||||
Tcir_isotig02489 | |||||||
HCC07138_1 | |||||||
ASC07437_1 | |||||||
NB09653 | |||||||
FC540170.1 | |||||||
ES743398.1 | |||||||
Acan_isotig03611 | |||||||
XI00970 | |||||||
AS03114 | |||||||
DVC00464_1 | |||||||
FC542922.1 | |||||||
AI317907.1 | |||||||
HC01092 | |||||||
AM744524.1 | |||||||
JO467854.1 | |||||||
Dviv_isotig01950 | |||||||
CRC11238_1 | |||||||
TDC02524_1 | |||||||
ACC16902_1 | |||||||
OVC01353_1 | |||||||
Dviv_isotig00290 | |||||||
HC00651 | |||||||
AS05615 | |||||||
CJC10899_1 | |||||||
Dviv_isotig10539 | |||||||
EX551040.1 | |||||||
EX540983.1 | |||||||
ACC17840_1 | |||||||
ACC33542_1 | |||||||
PT00246 | |||||||
JI172473.1 | |||||||
Oden_isotig22554 | |||||||
HBC02071_1 | |||||||
AE03029 | |||||||
ES739645.1 | |||||||
JI173745.1 | |||||||
GW411018.1 | |||||||
Experimental_info | Microarray_results | SMD_T25C8.3 | |||||
SMD_Y76A2C.A | |||||||
189946_at | |||||||
A_12_P134030 | |||||||
Aff_T25C8.3 | |||||||
GPL19516_CGZ0012395 | |||||||
GPL19516_CGZ0036779 | |||||||
GPL21109_Cat_T25C8.3 | |||||||
GPL21109_T25C8.3 | |||||||
GPL3518_CE18965 | |||||||
Expression_cluster (66) | |||||||
Map_info | Map | III | Position | 21.2828 | Error | 0.003537 | |
Positive | Positive_clone | T25C8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |