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WormBase Tree Display for Gene: WBGene00004431

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Name Class

WBGene00004431SMapS_parentSequenceC09D4
IdentityVersion1
NameCGC_namerpl-19
Sequence_nameC09D4.5
Molecular_nameC09D4.5
C09D4.5.1
CE08034
C09D4.5.2
Other_nameCELE_C09D4.5Accession_evidenceNDBBX284601
Public_namerpl-19
DB_infoDatabaseAceViewgene1G54
WormQTLgeneWBGene00004431
WormFluxgeneWBGene00004431
NDBlocus_tagCELE_C09D4.5
PanthergeneCAEEL|WormBase=WBGene00004431|UniProtKB=O02639
familyPTHR10722
NCBIgene172201
RefSeqproteinNM_059207.9
SwissProtUniProtAccO02639
TREEFAMTREEFAM_IDTF313598
UniProt_GCRPUniProtAccO02639
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:35WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrpl
Allele (21)
Legacy_informationOrthologous to yeast (S.cerevisiae) ribosomal protein rpl19 using blastP
StrainWBStrain00002868
RNASeq_FPKM (74)
GO_annotation (11)
Contained_in_operonCEOP1252
Ortholog (36)
Structured_descriptionConcise_descriptionrpl-19 encodes a large ribosomal subunit L19 protein.Curator_confirmedWBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Involved in determination of adult lifespan. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Is an ortholog of human RPL19 (ribosomal protein L19).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC09D4.5
Corresponding_transcriptC09D4.5.1
C09D4.5.2
Other_sequenceGW410735.1
FE919232.1
OOC00372_1
FC817358.1
EX914654.1
ES410281.1
CR11559
EX008545.1
FE912816.1
EX011878.1
ES743142.1
TCC00108_1
GO252222.1
FE909242.1
FE920016.1
CBC05555_1
FE919410.1
FC545198.1
EX911542.1
MI07187
HG08275
EV853438.1
BE124999.1
CR09263
EX009645.1
EX013105.1
EX007530.1
CRC09050_1
CBC10870_1
ES740911.1
ES410554.1
ASC22245_1
ES740568.1
EX557388.1
GRC00102_1
GP01235
FE915882.1
BUC00892_1
BXC01912_1
SS01473
Hbac_isotig00980
SRC00660_2
Dviv_isotig25317
FC811785.1
HSC00687_1
AW308581.1
AS04913
HS01226
CJC03805_1
Tcir_isotig07213
BMC12432_1
FE919741.1
AE00840
HGC05555_1
Oden_isotig13286
PTC02166_1
XIC00262_2
ES411143.1
TCC00109_1
BMC12433_1
CGC00842_1
FE916342.1
EX007992.1
CK854769.1
FG975304.1
EV854050.1
AYC01551_2
PT02641
EX915433.1
GR11942
Tcir_isotig24820
GW412883.1
EX914497.1
EX536775.1
ES739959.1
SC00137
ES742788.1
ASC01471_2
DVC01533_1
EX912483.1
AS10075
EX913354.1
DN557922.1
FG621036.1
FE910586.1
AS14795
CB038455.1
EX564635.1
ES409510.1
FE919361.1
CBC00376_1
EX014999.1
FC546568.1
EX911294.1
LSC00412_1
FG621034.1
JI181154.1
NB06654
CJC04924_1
EX006915.1
EX916407.1
EX552640.1
GW406105.1
AS04562
AS02069
HGC03939_1
HGC09375_1
CJC00198_1
EX915679.1
EX009183.1
NAC01666_1
ES743815.1
HS00954
DN557104.1
CR11939
EX910141.1
AS14963
AS02682
MH07358
GR367892.1
EX913613.1
CK850746.1
ES738973.1
EX008651.1
CK850392.1
ACC04373_1
GW410135.1
HO243954.1
GW413277.1
EX910195.1
PPC00481_1
TCC00110_1
CB039201.1
AS02431
ES411047.1
EX007941.1
ES411326.1
MAC01494_1
BQ381377.1
EX911996.1
AW355755.1
MCC00643_1
CSC00919_1
ES408874.1
FC541285.1
ES413867.1
CK850666.1
CK726160.1
EX916303.1
EX014121.1
FD517278.1
TM02130
ES742008.1
EX011875.1
FK807394.1
AYC01551_1
ES741287.1
FC810060.1
EX006968.1
EX916230.1
Hbac_isotig07276
EX916343.1
ACC01107_1
AS15947
Tcol_isotig14158
HG03015
JI175582.1
FE918706.1
AS01377
FE910943.1
FK800798.1
XI00243
ACC40066_1
CRC00090_1
FK808961.1
ES744607.1
JI466005.1
CR11923
BQ381251.1
AS07844
ES743385.1
SSC01113_1
HBC05052_1
BU087277.1
AIC00278_1
GW408245.1
CK726333.1
EX562664.1
AI366652.1
RSC00158_1
FC817133.1
MIC06203_1
MPC00209_1
HO348256.1
FE919009.1
FC815714.1
Acan_isotig11084
MH01227
TX00567
FC818770.1
FC815428.1
FC810325.1
GR979228.1
EX009537.1
ES739243.1
EV851199.1
CJC11337_1
CK854950.1
FD516000.1
Acan_isotig13181
FE909653.1
AI815300.1
TCC02155_1
GR977947.1
Hbac_isotig00979
NBC00525_1
ES569944.1
EX008272.1
AS02960
MC01244
TDC00432_1
EX914926.1
Acan_isotig13260
Name_isotig00993
FE910992.1
OVC01055_1
CB037764.1
MIC06257_1
XI04953
MP00539
CB038840.1
GW407079.1
CJC06163_1
EX565297.1
FC810092.1
ES739532.1
CK850752.1
FD515625.1
FC810583.1
GR367863.1
FE915436.1
EH005543.1
GPC00517_1
FE911458.1
FE916855.1
CB036433.1
DVC01889_1
TDC01997_1
EX013756.1
EX011527.1
EX911530.1
ES412435.1
EX916285.1
EX566464.1
PSC00635
EX911051.1
ES412164.1
MI08119
DI01644
FC815466.1
FC816009.1
FD514149.1
TX00396
HBC00492_1
ASC00276_1
PPC11569_1
FD515981.1
FE911832.1
ES412448.1
FM207683.1
ES569931.1
FE910717.1
MCC00621_1
GW412602.1
Oden_isotig13284
ES742601.1
EX014724.1
AS01764
DN557528.1
ASC16523_2
FG621035.1
FE918562.1
EX910143.1
FC817252.1
MI06958
TSC05405_1
HBC26085_1
TMC00080_1
WBC01392_1
Oden_isotig21574
DN557639.1
EX009716.1
DV019201.1
EY465889.1
EX011368.1
FG621033.1
SRC00660_1
MA02157
FE913543.1
EY469338.1
FC811684.1
FE906241.1
BE491830.1
EX911591.1
ASC01471_1
ES742829.1
GR17229
ES413441.1
GW407141.1
Tcir_isotig07264
TX00812
CRC03758_1
PSC02232_1
PP00556
GO251378.1
ES408598.1
N21823.1
EX914905.1
EX916324.1
Oden_isotig13285
JK315811.1
FE910627.1
SR00965
CR03603
ES741534.1
DIC01313_1
ES742227.1
HC01621
ES408821.1
GW406376.1
XIC00262_1
EV853000.1
PPC00299_1
HG10176
ES411565.1
GP01033
EX915214.1
GW406708.1
EX911671.1
FE916972.1
FK805456.1
JI220129.1
EX553988.1
DN558018.1
AS02308
EX912124.1
FG972987.1
FE911387.1
ES740703.1
HG11916
CK854989.1
EX914628.1
CR02836
TS01452
EX007032.1
ES413349.1
OVC04037_1
CR02713
MC01057
AA294132.1
XI02796
CR09855
MH00043
MHC07424_1
MP01289
EX008377.1
TX01806
MHC06154_1
RSC00429_1
BXC00270_1
JO474971.1
EX014146.1
ES742460.1
EX915668.1
ES411961.1
GR977473.1
BMC02351_1
HCC01739_1
AE00828
ES739787.1
Associated_featureWBsf649168
WBsf649169
WBsf664246
WBsf664247
WBsf664248
WBsf1009833
WBsf1009834
WBsf219436
WBsf219437
Experimental_infoRNAi_result (22)
Expr_patternChronogram1736
Expr5214
Expr1017892
Expr1032235
Expr1144254
Expr2015447
Expr2033682
Drives_constructWBCnstr00003388
WBCnstr00035491
Construct_productWBCnstr00035491
Microarray_results (23)
Expression_cluster (182)
Interaction (239)
Map_infoMapIPosition0.03261Error0.004392
PositivePositive_cloneC09D4Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00004402
WBPaper00025088
WBPaper00029008
WBPaper00029435
WBPaper00038491
WBPaper00049828
WBPaper00055090
WBPaper00064339
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene