WormBase Tree Display for Gene: WBGene00017347
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| WBGene00017347 | SMap | S_parent | Sequence | F10E7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F10E7.5 | |||||||
| Molecular_name | F10E7.5 | ||||||||
| F10E7.5.1 | |||||||||
| CE04360 | |||||||||
| F10E7.5.2 | |||||||||
| Other_name | CELE_F10E7.5 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F10E7.5 | ||||||||
| DB_info | Database | AceView | gene | 2H403 | |||||
| WormQTL | gene | WBGene00017347 | |||||||
| WormFlux | gene | WBGene00017347 | |||||||
| NDB | locus_tag | CELE_F10E7.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017347|UniProtKB=Q19302 | |||||||
| family | PTHR45841 | ||||||||
| NCBI | gene | 174168 | |||||||
| RefSeq | protein | NM_063069.6 | |||||||
| TREEFAM | TREEFAM_ID | TF300111 | |||||||
| TrEMBL | UniProtAcc | Q19302 | |||||||
| UniProt_GCRP | UniProtAcc | Q19302 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (14) | |||||||||
| Strain | WBStrain00001682 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00064282 | ||||||||
| 00064283 | |||||||||
| 00064284 | |||||||||
| 00064285 | |||||||||
| 00064286 | |||||||||
| 00064287 | |||||||||
| 00064288 | |||||||||
| 00064289 | |||||||||
| 00064290 | |||||||||
| 00064291 | |||||||||
| Contained_in_operon | CEOP2666 | ||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00004408 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00004409 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00004410 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00016493 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to be involved in nuclear-transcribed mRNA catabolic process; rRNA processing; and ribosomal large subunit biogenesis. Predicted to be located in nucleolus. Predicted to be part of preribosome, large subunit precursor. Is an ortholog of human MRTO4 (MRT4 homolog, ribosome maturation factor). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F10E7.5 | |||||||
| Corresponding_transcript | F10E7.5.1 | ||||||||
| F10E7.5.2 | |||||||||
| Other_sequence | HGC02290_1 | ||||||||
| Tcir_isotig00796 | |||||||||
| Tcir_isotig00794 | |||||||||
| HC03491 | |||||||||
| GR977866.1 | |||||||||
| TSC01118_1 | |||||||||
| XIC02822_1 | |||||||||
| MHC00272_1 | |||||||||
| HG02652 | |||||||||
| Dviv_isotig17901 | |||||||||
| SR02812 | |||||||||
| FC816898.1 | |||||||||
| Oden_isotig12205 | |||||||||
| ES569020.1 | |||||||||
| ES567222.1 | |||||||||
| EW742514.1 | |||||||||
| NBC01143_1 | |||||||||
| Oden_isotig12206 | |||||||||
| FC811357.1 | |||||||||
| DVC02538_1 | |||||||||
| Tcir_isotig00797 | |||||||||
| ES561930.1 | |||||||||
| EX008807.1 | |||||||||
| Hbac_isotig04293 | |||||||||
| EV852152.1 | |||||||||
| Dviv_isotig17902 | |||||||||
| PPC00780_1 | |||||||||
| HCC01914_1 | |||||||||
| PP00507 | |||||||||
| GR977226.1 | |||||||||
| EX011226.1 | |||||||||
| RSC03677_1 | |||||||||
| EW742216.1 | |||||||||
| Oden_isotig12207 | |||||||||
| JI476273.1 | |||||||||
| SRC02014_1 | |||||||||
| HBC26457_1 | |||||||||
| Tcol_isotig14653 | |||||||||
| Tcir_isotig00793 | |||||||||
| CBC00298_1 | |||||||||
| FC811377.1 | |||||||||
| ES409925.1 | |||||||||
| BXC01240_1 | |||||||||
| EY472552.1 | |||||||||
| Tcir_isotig00792 | |||||||||
| Tcir_isotig00795 | |||||||||
| Acan_isotig12074 | |||||||||
| ACC12043_1 | |||||||||
| RS08656 | |||||||||
| NB07240 | |||||||||
| CJC01080_1 | |||||||||
| JI179256.1 | |||||||||
| SC00138 | |||||||||
| XI03301 | |||||||||
| GR977904.1 | |||||||||
| FC816878.1 | |||||||||
| Associated_feature | WBsf644352 | ||||||||
| WBsf988355 | |||||||||
| WBsf988356 | |||||||||
| WBsf1012486 | |||||||||
| WBsf221557 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00071779 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00082598 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062197 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00071161 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044260 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013063 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030773 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00008631 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00082510 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1388 | ||||||||
| Chronogram1991 | |||||||||
| Expr5720 | |||||||||
| Expr1010299 | |||||||||
| Expr1037457 | |||||||||
| Expr1148218 | |||||||||
| Expr2002398 | |||||||||
| Expr2020616 | |||||||||
| Drives_construct | WBCnstr00004217 | ||||||||
| WBCnstr00027368 | |||||||||
| Construct_product | WBCnstr00027368 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (118) | |||||||||
| Interaction (202) | |||||||||
| Map_info | Positive | Positive_clone | F10E7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 0.494914 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
