WormBase Tree Display for Gene: WBGene00054695

WBGene00054695 SMap: S_parent: Sequence: Crem_Contig7
  Identity: Version: 3
    Name: CGC_name: Cre-rpia-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE25085
      Molecular_name: CRE25085
        CRE25085.1
        RP25759
      Other_name: cr01.sctg4.wum.56
      Public_name: Cre-rpia-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 03 Jul 2008 11:44:51 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE25085
                Other_name: cr01.sctg4.wum.56
        3 24 Sep 2008 14:46:18 WBPerson2970 Name_change: CGC_name: Cre-rpai-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rpia
    RNASeq_FPKM: WBls:0000004 33.1034 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        35.826 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        38.5485 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 20.0532 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        45.6683 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        47.9908 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        50.4886 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        52.9864 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        61.6429 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
      WBls:0000038 22.8728 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        59.2364 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        69.1614 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        85.6751 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 111.639 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        113.848 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        44.4826 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        51.8249 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        52.1318 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        75.0738 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        78.657 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        98.0157 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
      WBls:0000063 (12)
      WBls:0000101 52.5591 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        59.0869 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00150014
      00150015
    Ortholog (28)
    Paralog: WBGene00083699 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable ribose-5-phosphate isomerase activity. Predicted to be involved in pentose-phosphate shunt, non-oxidative branch. Is an ortholog of C. elegans rpia-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE25085
    Corresponding_transcript: CRE25085.1
    Other_sequence: SRC00719_1
      EX535867.1
      Tcir_isotig02681
      FC810691.1
      EY471459.1
      FC544276.1
      FC818548.1
      EX558244.1
      NBC00632_1
      FC539481.1
      FC817287.1
      TM00817
      GW410070.1
      SR00887
      PP01685
      FC540048.1
      EX500480.1
      Oden_isotig17229
      PPC00672_1
      CRC01595_1
      ACC05352_1
      CJC08287_1
      JI175200.1
      FC816130.1
      Acan_isotig06163
      FC811716.1
      Tcol_isotig17778
      TSC10249_1
      EX501918.1
      TMC00584_1
      EX538859.1
      Acan_isotig10758
      FC811969.1
      Acan_isotig06164
      FC816351.1
      BXC04726_1
      EX545460.1
      Oden_isotig17230
      ACC05843_1
      MJ04204
      EX541439.1
      CR08225
      FC817569.1
      FC812849.1
      TSC08167_1
      MJC03557_1
      ES564392.1
      CBC04948_1
      NB08204
      FC547409.1
      EX535599.1
      FC810897.1
      TSC12158_1
      PSC01212_1
      Tcir_isotig02680
      FG349814.1
  Experimental_info: Expr_pattern: Expr1107797
    Microarray_results: GPL14146_CRE25085_165-224_0.877_16_C
      GPL14146_CRE25085_433-492_0.948_1_B
      GPL14146_CRE25085_739-798_0.893_11_A
  Method: Gene