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WormBase Tree Display for Gene: WBGene00072311

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Name Class

WBGene00072311SMapS_parentSequenceCrem_Contig220
IdentityVersion3
NameCGC_nameCre-pdhb-1From_analysisInferred_from_orthology
Sequence_nameCRE13110
Molecular_nameCRE13110
CRE13110.1
RP22520
Other_namecr01.sctg340.wum.5
Public_nameCre-pdhb-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:29WBPerson1847EventCreated
203 Jul 2008 11:46:35WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE13110
Other_namecr01.sctg340.wum.5
308 Dec 2011 12:03:58WBPerson2970Name_changeCGC_nameCre-pdhb-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpdhb
RNASeq_FPKMWBls:000000472.1237From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
72.7921From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
73.4605From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:0000027146.341From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
164.455From_analysisRNASeq.remanei.WBls:0000027.control_mean
175.835From_analysisRNASeq.remanei.WBls:0000027.control_median
205.33From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
208.992From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
97.1578From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:0000038147.688From_analysisRNASeq.remanei.WBls:0000038.control_mean
169.847From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
177.532From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
95.6858From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:0000041141.131From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
144.054From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
149.838From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
154.135From_analysisRNASeq.remanei.WBls:0000041.control_median
154.833From_analysisRNASeq.remanei.WBls:0000041.control_mean
158.431From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
161.88From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
173.666From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
WBls:0000063 (12)
WBls:0000101153.185From_analysisRNASeq.remanei.total_over_all_stages.control_mean
161.912From_analysisRNASeq.remanei.total_over_all_stages.control_median
GO_annotation00166156
Ortholog (32)
ParalogWBGene00065442Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00065677Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00073525Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00074556Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00075937Caenorhabditis remaneiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable catalytic activity. Is an ortholog of C. elegans pdhb-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE13110
Corresponding_transcriptCRE13110.1
Other_sequenceCJC05807_1
BXC03230_1
EV852369.1
EX536487.1
FC540620.1
ASC09362_1
ALC00755_1
EY473579.1
EX537331.1
PPC02426_1
BUC01782_1
EX547444.1
CK855048.1
JI170699.1
TSC00943_1
Acan_isotig07008
MIC07615_1
TS03405
EF413922.1
ES273367.1
OOC00843_1
HC04606
BMC12487_1
JI178869.1
TVC01136_1
AS02467
FC543602.1
TSC00943_2
CBC07533_1
Hbac_isotig03665
TCC00627_1
ACC20884_1
GO254774.1
JO475207.1
ES569195.1
Tcir_isotig27472
ES880574.1
FC540433.1
TDC01664_1
EB763512.1
ASC00080_1
DI00139
MJ00182
AS12319
BU585572.1
Oden_isotig12109
ACC09505_1
EX540344.1
EX546856.1
JI215432.1
EX540762.1
Tcol_isotig15814
BU587104.1
EY458558.1
JI169701.1
MHC01343_1
JI212593.1
ASC33282_1
Dviv_isotig24460
EY463671.1
CRC00659_1
ES570411.1
EX536072.1
EX535697.1
ES567793.1
FC543791.1
EY471489.1
PP01403
TLC00085_1
MJC00991_1
JO475843.1
EX548498.1
JO471247.1
TS01089
DIC00532_1
ASC00050_1
CV199533.1
HCC07233_1
Oden_isotig12108
AS09467
BXC01006_1
BU585459.1
JI175978.1
EX550107.1
GO254800.1
EX541247.1
MH00650
JI172862.1
CB037072.1
BMC12488_1
CRC00992_1
TSC02121_1
ES561147.1
BMC05110_1
CR09025
AS02761
Name_isotig07204
JI169948.1
JO472154.1
WBC02353_1
BXC05987_1
ACC10778_1
EY463366.1
CV200571.1
DVC02269_1
JO472393.1
HC05524
EX550628.1
Acan_isotig09420
EX546159.1
JO475044.1
JK315455.1
CR02341
AS00714
FC541413.1
BU586613.1
EX539713.1
MJC00678_1
ALC00083_1
ES562210.1
JI471735.1
ES564147.1
EF413920.1
BU586148.1
CJC04007_1
Acan_isotig09812
BU586834.1
TX00454
EY467500.1
JO475506.1
Tcir_isotig06767
TV01349
EY464240.1
PVC00510_1
ACC06663_1
CR03154
FC546659.1
ES568547.1
Name_isotig09118
Experimental_infoExpr_patternExpr1096757
Microarray_resultsGPL14146_CRE13110_1011-1070_0.941_1_B
GPL14146_CRE13110_811-870_0.860_15_A
GPL14146_CRE13110_865-924_0.931_2_C
MethodGene