WormBase Tree Display for Gene: WBGene00078742

WBGene00078742 SMap: S_parent: Sequence: Crem_Contig12
  Identity: Version: 2
    Name: CGC_name: Cre-ymel-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE04597
      Molecular_name: CRE04597
        CRE04597.1
        RP31644
      Public_name: Cre-ymel-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 03 Jul 2008 11:46:53 WBPerson4055 Event: Created
        2 04 Jul 2008 11:06:47 WBPerson4055 Name_change: CGC_name: Cre-ymel-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ymel
    RNASeq_FPKM: WBls:0000004 24.6204 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        25.5748 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        26.5291 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 24.7611 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        26.887 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        27.8249 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        28.7628 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        35.3361 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        8.05859 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 11.8629 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
        7.78219 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        9.72062 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        9.78857 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
      WBls:0000041 51.7147 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        53.9355 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        56.3248 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        61.9128 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        62.0673 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        67.5009 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        71.332 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        71.5959 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
      WBls:0000063 (12)
      WBls:0000101 30.3063 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        36.7574 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00169703
      00169704
      00169705
      00169706
      00169707
      00169708
    Ortholog (35)
    Paralog (32)
    Structured_description: Automated_description: Predicted to enable ATP binding activity; ATP hydrolysis activity; and peptidase activity. Predicted to be involved in proteolysis. Predicted to be located in membrane. Is an ortholog of C. elegans ymel-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE04597
    Corresponding_transcript: CRE04597.1
    Other_sequence: FC543801.1
      FC546981.1
      GPC03027_1
      HG00442
      FK803424.1
      CBC00231_1
      Acan_isotig07650
      EX561892.1
      Dviv_isotig14573
      JI165190.1
      MC03924
      SS03280
      SSC02052_1
      PTC01053_1
      SSC05441_1
      EX548862.1
      GR978848.1
      Oden_isotig17208
      CBC01308_1
      PT01231
      ACC05913_1
      GRC01938_1
      HGC03756_1
      MJ03705
      Dviv_isotig34621
      Dviv_isotig14574
      Tcol_isotig08577
      Tcol_isotig08578
      SS02833
      CJC02828_1
      FC551051.1
      EY458179.1
      FC542364.1
      JI462816.1
      FC540404.1
      FK803448.1
      FK800855.1
      ACC13648_1
      MJC02800_1
      Hbac_isotig01895
      FC539458.1
      Oden_isotig17207
      RS05976
      MCC03779_1
      FC551582.1
      RSC02978_1
      ACC15481_1
      SC00349
      GP02012
      BUC00720_1
      HGC03342_1
      JO472987.1
      FK810028.1
      HG09004
      JI474999.1
      Acan_isotig19416
      GRC02019_1
      FC542665.1
  Experimental_info: Expr_pattern: Expr1095254
    Microarray_results: GPL14146_CRE04597_1304-1363_0.874_33_B
      GPL14146_CRE04597_1367-1426_0.902_16_C
      GPL14146_CRE04597_1495-1554_0.920_7_A
  Method: Gene