WormBase Tree Display for Gene: WBGene00084827

WBGene00084827 SMap: S_parent: Sequence: Crem_Contig60
  Identity: Version: 2
    Name: CGC_name: Cre-col-13.1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE12880
      Molecular_name: CRE12880
        CRE12880.1
        RP45248
      Public_name: Cre-col-13.1
    Species: Caenorhabditis remanei
    History: Version_change: 1 03 Jul 2008 11:46:54 WBPerson4055 Event: Created
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cre-col-13.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    RNASeq_FPKM: WBls:0000004 0.318913 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        0.358169 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        0.397426 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 0.65401 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        104.935 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        1.30802 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
            RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        26.5608 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
      WBls:0000038 200.951 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        216.469 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        399.657 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        781.552 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 124.204 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        146.694 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        153.023 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        27.2083 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        34.0259 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        61.9226 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        91.1796 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        93.0633 From_analysis: RNASeq.remanei.WBls:0000041.control_median
      WBls:0000063 (12)
      WBls:0000101 176.987 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        442.296 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00172069
    Ortholog (41)
    Paralog (183)
    Structured_description: Automated_description: Predicted to be a structural constituent of cuticle. Is an ortholog of C. elegans col-13. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE12880
    Corresponding_transcript: CRE12880.1
    Other_sequence: CRC00187_1
      WBC02159_1
      FD514687.1
      AJ224969.1
      JI173778.1
      EX546522.1
      CRC09888_1
      SSC00113_4
      CJC15243_1
      HGC02721_1
      SRC09673_1
      PP00036
      LSC01809_1
      SS01619
      CN007728.1
      SSC00060
      EG025605.1
      Tcol_isotig22311
      OOC00199_1
      BXC01287_1
      Oden_isotig09639
      Dviv_isotig25155
      FG618990.1
      BG310650.1
      CBC04700_1
      FC809619.1
      AF035657.1
      TDC02529_1
      CJC04428_1
      PPC00836_1
      CJC14502_1
      GP00262
      HGC09762_1
      FD517118.1
      SRC01767_1
      CR01097
      Oden_isotig09642
      GPC00113_1
      HG07534
      BXC02427_1
      CJC00132_2
      ASC04181_1
      DN190294.1
      FC811709.1
      SS00055
      SS01593
      Oden_isotig09638
      WBC00006_1
      FC814927.1
      CSC02084_1
      AS04391
      SS01337
      SS01550
      ACC05920_1
      Oden_isotig25843
      PT02814
      FC817278.1
      CSC02101_1
      FC811704.1
      HG07756
      Oden_isotig09641
      CK854709.1
      CR12357
      BMC00160_1
      TX01340
      GO240167.1
  Method: Gene