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WormBase Tree Display for Gene: WBGene00127791

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Name Class

WBGene00127791SMapS_parentSequenceCjap.Contig17468
IdentityVersion2
NameCGC_nameCjp-col-20From_analysisInferred_from_orthology
Sequence_nameCJA08588
Molecular_nameCJA08588
CJA08588.1
JA02367
Public_nameCjp-col-20
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:21WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCjp-col-20
229 Jul 2011 11:13:37WBPerson4055EventImportedAugustus import
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcol
RNASeq_FPKMWBls:00000040From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000270From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000380.64243From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
0.88177From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
1.12111From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
WBls:00000411344.85From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
1572.38From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
1638.52From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
2280.78From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
2569.86From_analysisRNASeq.japonica.WBls:0000041.control_median
2572.12From_analysisRNASeq.japonica.WBls:0000041.control_mean
2858.94From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
3563.64From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
3572.87From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
3745.01From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
WBls:00001011572.38From_analysisRNASeq.japonica.total_over_all_stages.control_median
1582.98From_analysisRNASeq.japonica.total_over_all_stages.control_mean
GO_annotation00193458
Ortholog (23)
Paralog (183)
Structured_descriptionAutomated_descriptionPredicted to be a structural constituent of cuticle. Is an ortholog of C. elegans col-20.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA08588
Corresponding_transcriptCJA08588.1
Other_sequencePPC02188_1
EX013762.1
ES414122.1
ES410986.1
ES744677.1
LSC01211_1
OVC00238_1
JI178832.1
EX012471.1
EG025641.1
AS03191
FK670291.1
EX911382.1
ASC02105_2
AS10285
CD203478.1
TDC02624_1
BG467589.1
ES743196.1
DVC00846_1
AM744316.1
BF918247.1
EX913963.1
EX013947.1
ES409635.1
ES408684.1
EX009404.1
ES409662.1
ES411842.1
DVC00521_1
ES413955.1
EX911162.1
JI178764.1
Dviv_isotig25416
AM744409.1
EV853834.1
FM207739.1
EX008941.1
TDC03062_1
CR08293
JI177508.1
Dviv_isotig24289
DN190476.1
JI213650.1
EX009345.1
EX007996.1
AS00227
ES742393.1
EX011700.1
ES740502.1
PPC03054_1
CBC06917_1
FF682187.1
EX913940.1
ES414120.1
BXC01287_1
ES413363.1
ASC02276_1
EX013111.1
ES412770.1
JI176348.1
FK670296.1
EX007075.1
EX010459.1
EX013571.1
ES743772.1
EX914993.1
OVC00309_1
ES739466.1
PE00267
EX008081.1
ES413923.1
EX535854.1
ASC00059_1
ES739149.1
OOC01203_1
EX010610.1
AM744078.1
EX011451.1
EX910352.1
AS01102
Hbac_contig01396
EW744501.1
AS02400
EX007228.1
ASC02322_1
GE639063.1
NAC00097_1
ES411917.1
EX913808.1
ES739526.1
EV851154.1
ES410871.1
AS08549
ES410894.1
EX013419.1
JI212952.1
MHC07417_1
JO469567.1
FG976268.1
ES739730.1
ES742229.1
HBC25834_1
ASC26348_1
Oden_isotig23102
AS12298
JO468060.1
AS02223
DN191062.1
EX914396.1
ES410428.1
EX014941.1
ES413253.1
CR03727
ASC17350_1
ES409480.1
EX014629.1
CJC01675_1
ES742466.1
DN191042.1
DN190589.1
EX012159.1
FG618994.1
TX00600
EX010869.1
Oden_isotig09638
BF023747.1
AM744311.1
EV851450.1
ES411468.1
TCC00636_1
EX546309.1
Tcir_isotig25463
EX015014.1
ES741123.1
ES740339.1
EX913852.1
GO240491.1
EG025643.1
AS00144
ASC00151_1
ASC02105_1
ES739913.1
AA618752.1
Tcol_isotig20572
NAC00375_1
ES409406.1
Tcir_isotig18947
CK855247.1
ES408989.1
EX006988.1
ES409918.1
ES739758.1
JI459229.1
CRC10936_1
EX007632.1
JI213591.1
EX910419.1
Tcir_isotig23871
EX912342.1
EV853363.1
HBC00189_1
AM744404.1
AM744204.1
EX014577.1
AS00154
EX538773.1
ES739067.1
CK854785.1
EX009543.1
EX013964.1
EX915742.1
HCC01272_1
AE04269
EV851465.1
MI01148
EG025565.1
BMC06875_2
EX007375.1
EV851945.1
JI228372.1
JI482051.1
EX911839.1
BU586584.1
EX012740.1
EX014428.1
CBC03227_1
OVC00363_1
ES740224.1
EV850200.1
ES412169.1
OVC07797_1
EV850204.1
ASC17350_2
ES410457.1
HBC00189_2
ES411537.1
Experimental_infoExpr_patternExpr1090350
Microarray_resultsGPL14145_CJA08588_356-415_0.778_19_A
MethodGene