WormBase Tree Display for Gene: WBGene00129713

WBGene00129713 SMap: S_parent: Sequence: Cjap.Contig17247
  Identity: Version: 2
    Name: CGC_name: Cjp-sodh-1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA10509
      Molecular_name: CJA10509
        CJA10509.1
        JA26449
      Public_name: Cjp-sodh-1
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:22 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-sodh-1
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sodh
    RNASeq_FPKM: WBls:0000004 29.9433 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 185.301 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 32.1561 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
        34.979 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        37.802 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
      WBls:0000041 109.536 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        124.419 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        136.85 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        145.944 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        204.49 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        52.4352 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        67.5019 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        70.1124 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        74.5384 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        99.4787 From_analysis: RNASeq.japonica.WBls:0000041.control_median
      WBls:0000101 70.1124 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        89.3456 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00195039
    Ortholog (32)
    Paralog (12)
    Structured_description: Automated_description: Predicted to enable oxidoreductase activity. Is an ortholog of C. elegans adh-1. In C. elegans, adh-1 is involved in defense response to Gram-positive bacterium. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA10509
    Corresponding_transcript: CJA10509.1
    Other_sequence: FD515441.1
      CBC00091_2
      FD515491.1
      FG349659.1
      FD516331.1
      CR08597
      BXC06726_1
      FD517509.1
      FG348233.1
      FD516830.1
      FD516381.1
      CBC00091_3
      CSC00094_1
      FD514670.1
      FD517067.1
      CRC07992_1
      CJC00272_1
      FD517698.1
      FD516657.1
      FD514399.1
      FD517167.1
      FD514741.1
      CR02736
      BXC02944_1
      FD515257.1
      BUC02346_1
      BUC01746_1
      FG354895.1
      CRC01708_1
      FD514378.1
      FD514117.1
      ZP00157
      FD516932.1
      FD514322.1
      FD515765.1
      CBC00091_1
      ZPC00225_1
      BXC00471_1
      FD517333.1
      FD517015.1
      FD517008.1
      FD515490.1
      BXC02207_1
      BUC00056_1
      CBC10079_1
      FD516283.1
      BUC01573_1
      FG350302.1
      CBC03256_1
      CJC00371_1
      FG581192.1
      FD517616.1
      CJC06103_1
      CR04903
      FD517306.1
      FD515550.1
      CBC07787_1
      BXC00105_1
      FD516990.1
  Experimental_info: Expr_pattern: Expr1077200
    Microarray_results: GPL14145_CJA10509_610-669_0.922_5_C
      GPL14145_CJA10509_835-894_0.602_105_B
      GPL14145_CJA10509_963-1022_0.580_111_A
  Method: Gene