WormBase Tree Display for Gene: WBGene00136106

WBGene00136106 SMap: S_parent: Sequence: Cjap.Contig7087
  Identity: Version: 2
    Name: CGC_name: Cjp-cgh-1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA16901
      Molecular_name: CJA16901
        CJA16901.1
        JA32356
      Public_name: Cjp-cgh-1
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:23 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-cgh-1
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cgh
    RNASeq_FPKM: WBls:0000004 113.224 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 43.7837 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 94.3754 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        94.7482 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        95.121 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 1306.59 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        136.182 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        1417.31 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        1470.66 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        148.581 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        163.578 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        164.469 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        572.051 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        723.375 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        979.633 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
      WBls:0000101 148.581 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        471.808 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00200146
      00200147
    Ortholog (41)
    Paralog (54)
    Structured_description: Automated_description: Predicted to enable ATP binding activity and nucleic acid binding activity. Is an ortholog of C. elegans cgh-1. In C. elegans, cgh-1 is involved in several processes, including P-body assembly; determination of adult lifespan; and negative regulation of translation. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA16901
    Corresponding_transcript: CJA16901.1
    Other_sequence: CGC00855_1
      PPC00034_1
      EX501467.1
      TS03070
      SRC02895_1
      ACC07332_1
      XI05074
      EY460212.1
      BUC00107_1
      EY461707.1
      PP01158
      EX501048.1
      FC551390.1
      TMC01353_1
      HGC05392_1
      JI214499.1
      HG01011
      Acan_isotig16758
      Tcir_isotig15191
      Oden_isotig18462
      HGC12137_1
      BXC01490_1
      EX535982.1
      JI165745.1
      CBC03736_1
      FC546823.1
      FC555673.1
      CJC08288_1
      SR03193
      EY459626.1
      HG05222
      DI02051
      EX916137.1
      HGC02507_1
      ES570878.1
      Dviv_isotig22895
      FC550389.1
      HG11796
      TM01663
      Tcir_isotig23830
      CJC13232_1
      XIC04134_1
      FC819473.1
      HG05217
      JI165585.1
      FC554982.1
      ES564773.1
      EX564375.1
      BXC05010_1
      AM157797.1
      EY464182.1
      FC553737.1
      TSC00175_1
      DIC01678_1
      FC553320.1
      GE626393.1
      TS00858
      CGC00485_1
      BUC00755_1
      DI02386
      PP02300
      PPC01408_1
      Name_isotig02193
      SR02107
      EY462312.1
      ES564269.1
      HBC21987_1
      ES561815.1
      EX564040.1
      ES567370.1
      FC818250.1
      FG583596.1
      Acan_isotig07746
      ES566154.1
      ODC00055_1
      FC819862.1
      TM03230
      BUC00957_1
  Experimental_info: Expr_pattern: Expr1075769
    Microarray_results: GPL14145_CJA16901_810-869_0.930_5_C
      GPL14145_CJA16901_920-979_0.943_1_A
      GPL14145_CJA16901_931-990_0.942_2_B
  Method: Gene