WormBase Tree Display for Gene: WBGene00137026

WBGene00137026 SMap: S_parent: Sequence: Cjap.Contig17545
  Identity: Version: 2
    Name: CGC_name: Cjp-pccb-1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA17822
      Molecular_name: CJA17822
        CJA17822.1
        JA15040
      Public_name: Cjp-pccb-1
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:23 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-pccb-1
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pccb
    RNASeq_FPKM: WBls:0000004 112.526 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 184.503 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 177.198 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        178.122 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        179.047 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 110.826 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        115.178 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        131.667 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        152.508 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        156.888 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        158.159 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        162.768 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        56.7312 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        59.6462 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        63.8995 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
      WBls:0000101 121.131 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
        152.508 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
    Ortholog (33)
    Paralog: WBGene00121022 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00213009 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00214683 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: ClpP/crotonase-like domain superfamily; Carboxyl transferase domain; and Acetyl-CoA carboxylase. Is an ortholog of C. elegans pccb-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA17822
    Corresponding_transcript: CJA17822.1
    Other_sequence: AS01780
      Hbac_isotig02609
      CGC00359_1
      FD514654.1
      HC05648
      JO472013.1
      Acan_isotig02700
      CR02983
      NB08024
      ES741871.1
      HCC00524_1
      CR09735
      FC543381.1
      FC819062.1
      TS02945
      SS00549
      FC815255.1
      FC809895.1
      FC552019.1
      BI772967.1
      AS15783
      BI772844.1
      BXC05725_1
      Tcol_isotig15035
      TM00732
      CR06168
      ES412005.1
      EY461942.1
      NB09943
      OOC00354_1
      GW412873.1
      FK804987.1
      JO468113.1
      EX008261.1
      BQ804083.1
      CBC02487_1
      FC810584.1
      BUC01881_1
      HC05063
      ES739375.1
      FC815328.1
      CRC12061_1
      EX544379.1
      Oden_isotig12221
      JI171430.1
      CR03145
      NBC00412_1
      Dviv_isotig23414
      FE906447.1
      PPC10105_1
      CBC09790_1
      ES565878.1
      Acan_isotig02699
      EH005528.1
      EX540176.1
      TV00464
      DN153464.1
      CR02655
      TM03157
      Name_isotig03181
      CRC11077_1
      BI773222.1
      CJC03559_1
      FE912639.1
      TMC05025_1
      TLC00259_1
      JI168023.1
      CBC10851_1
      TV00281
      Dviv_isotig34572
      FC542086.1
      FK805384.1
      EX013760.1
      TM03156
      SRC08411_1
      FC809963.1
      TSC01658_1
      ACC03558_1
      EX915794.1
      ACC04528_1
      TVC00280_1
      FC541092.1
      HCC07479_1
      TVC00258_1
      EX010648.1
      PSC03244_1
      Dviv_isotig23379
      EY462027.1
      ASC00558_1
      ES739907.1
      ES880207.1
      JI254119.1
      SR00726
      HC08932
      SSC00027_1
      EX012711.1
      FC816010.1
      PPC03352_1
      SRC00497_1
      BI773208.1
      AS02564
      ACC17569_1
      Acan_isotig19435
      ES742497.1
      BI773057.1
      FC815209.1
      AIC00093_1
      HC02855
      PPC03369_1
      Hbac_isotig02668
      ACC04753_1
      CBC02015_1
      CRC05657_1
      HBC00820_1
      TMC00192_1
      EY467099.1
      FE910614.1
      SSC04179_1
      FD517667.1
  Experimental_info: Expr_pattern: Expr1087733
    Microarray_results: GPL14145_CJA17822_1272-1331_0.941_6_C
      GPL14145_CJA17822_1418-1477_0.854_32_A
      GPL14145_CJA17822_1538-1597_0.972_1_B
  Method: Gene