WormBase Tree Display for Gene: WBGene00140014

WBGene00140014 SMap: S_parent: Sequence: Cbre_Contig179
  Identity: Version: 2
    Name: CGC_name: Cbn-prpf-4 From_analysis: Inferred_from_orthology
      Sequence_name: CBN01289
      Molecular_name: CBN01289
        CBN01289.1
        CN09167
      Public_name: Cbn-prpf-4
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:50 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cbn-prpf-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: prpf
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 16.0471 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        32.0941 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 14.0181 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        15.7728 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        15.8609 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        17.7099 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        18.4492 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
      WBls:0000038 7.32448 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        7.35834 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        7.3922 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (17)
      WBls:0000101 3.9042 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        6.57211 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00203165
      00203166
      00203167
    Ortholog (30)
    Paralog (51)
    Structured_description: Automated_description: Predicted to enable ATP binding activity and protein kinase activity. Is an ortholog of C. elegans prpf-4. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN01289
    Corresponding_transcript: CBN01289.1
    Other_sequence: CBC01454_1
      EY466496.1
      HGC02451_1
      ACC22614_1
      FC539162.1
      Tcir_isotig15363
      JI478012.1
      FC540801.1
      FC553275.1
      Dviv_isotig11740
      GT737340.1
      HS00387
      PPC02178_1
      HG03546
      CRC11777_1
      PPC08386_1
      PP02437
      ES739272.1
      HBC01333_1
      EY471616.1
      HG00928
      Acan_isotig06210
      Oden_isotig18878
      GP00833
      JI164140.1
      FC550720.1
      GP00960
      RS06597
      Dviv_isotig21856
      JI234732.1
      GO251900.1
      Dviv_isotig11742
      GP01314
      Dviv_isotig11739
      PT01649
      PP02102
      TX01859
      FC554240.1
      HGC10368_1
      FG980135.1
      Dviv_isotig11741
      JI165251.1
      HSC00427_1
      EY458267.1
      PPC18795_1
      Hbac_isotig01878
      ACC12643_1
  Experimental_info: Microarray_results: GPL14142_CBN01289_1165-1224_0.711_214_C
      GPL14142_CBN01289_2047-2106_0.929_9_B
      GPL14142_CBN01289_2189-2248_0.927_11_A
      GPL14142_CBN22094_1460-1519_0.893_22_A
  Method: Gene