WormBase Tree Display for Gene: WBGene00155085

WBGene00155085 SMap: S_parent: Sequence: Cbre_Contig6
  Identity: Version: 2
    Name: CGC_name: Cbn-tspo-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN16360
      Molecular_name: CBN16360
        CBN16360.1
        CN24243
      Public_name: Cbn-tspo-1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:51 WBPerson4055 Event: Imported: from NGASP
        2 28 May 2021 19:05:19 WBPerson1983 Name_change: CGC_name: Cbn-tspo-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tspo
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 102.384 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        1110.15 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        606.267 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
      WBls:0000024 102.961 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        116.379 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        62.1478 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        65.5284 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        99.5243 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
      WBls:0000038 70.8793 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        76.2878 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        81.6962 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (18)
      WBls:0000101 143.517 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
        89.0735 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
    GO_annotation: 00215365
    Ortholog (25)
    Paralog: WBGene00139553 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00144475 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00150612 Caenorhabditis brenneri From_analysis: TreeFam
    Structured_description: Automated_description: Predicted to be located in membrane. Is an ortholog of C. elegans tspo-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN16360
    Corresponding_transcript: CBN16360.1
    Other_sequence: CBC03671_1
      GO240382.1
      JI467544.1
      OOC00960_1
      EL888295.1
      AYC03881_1
      BMC02787_1
      NAC00446_1
      Tcir_isotig07151
      WBC01768_1
      PPC05789_1
      HGC01119_2
      ASC21773_1
      Tcol_isotig21924
      JI465285.1
      HCC02347_1
      FE910371.1
      JI468204.1
      MJ00671
      JI172709.1
      MHC02788_1
      HG03462
      PPC17428_1
      TDC00381_1
      JO467737.1
      GW412368.1
      ACC00698_1
      FE919849.1
      SSC01796_1
      HG12206
      HC07790
      AE00169
      HG00093
      AM743643.1
      AE02216
      Acan_isotig11177
      PSC01577_1
      Dviv_isotig03931
      JI483278.1
      CK850309.1
      GW408498.1
      AS02245
      HGC01119_1
      OF00202
      MJC00003_1
      HG02318
      GW406519.1
      CR04149
      GW408846.1
      DIC00653_1
      Name_isotig06946
      JI472715.1
      BF918239.1
      HGC09587_1
      HGC11014_1
      Dviv_isotig03928
      JI465225.1
      JI481189.1
      PPC05344_1
      GW412155.1
      JI481531.1
      JI472969.1
      NB09722
      JI475698.1
      HGC08964_1
      DI01103
      HG02003
      SS01421
      OVC09106_1
      Tcol_isotig12652
      PVC01878_1
      ES739528.1
      HC03977
      BU666848.1
      CRC06944_1
      GE639040.1
  Method: Gene