WormBase Tree Display for Gene: WBGene00160474

WBGene00160474 SMap: S_parent: Sequence: Cbre_Contig36
  Identity: Version: 2
    Name: CGC_name: Cbn-tpi-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN21749
      Molecular_name: CBN21749
        CBN21749.1
        CN02288
      Public_name: Cbn-tpi-1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:52 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cbn-tpi-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tpi
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        20.947 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        41.8939 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 111.431 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        114.766 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        81.7518 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        87.4341 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        93.287 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
      WBls:0000038 132.96 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        141.044 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        149.128 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (17)
      WBls:0000101 67.4023 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        86.6435 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00219850
    Ortholog (31)
    Paralog: WBGene00160708 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable triose-phosphate isomerase activity. Is an ortholog of C. elegans tpi-1. In C. elegans, tpi-1 is involved in cell redox homeostasis and determination of adult lifespan. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN21749
    Corresponding_transcript: CBN21749.1
    Other_sequence: CBC01602_1
      CR08660
      CK725677.1
      EX011985.1
      CJC11952_1
      OVC00783_1
      ACC08801_1
      PPC04688_1
      EX915769.1
      Oden_isotig06813
      NAC02287_1
      GRC04976_1
      SS00312
      Tcir_isotig29891
      Tcir_isotig06095
      EX540300.1
      MIC06701_1
      EX566704.1
      Hbac_isotig03263
      EV853732.1
      BUC02082_1
      NB07351
      TS05156
      CN478385.1
      EX008808.1
      TDC00565_1
      HG04304
      DVC02798_1
      GO239802.1
      ACC02159_1
      ACC22839_1
      CR01012
      CSC01501_1
      EX912757.1
      FE914360.1
      BU088606.1
      CJC00161_1
      PPC05246_1
      EX915184.1
      GR11139
      CRC06175_1
      PP00721
      FC821898.1
      EX007184.1
      BMC11888_1
      TMC01193_1
      EX559173.1
      RS06000
      ES410417.1
      EX012086.1
      EX916697.1
      Tcol_isotig04888
      EX912534.1
      ES740652.1
      DA00820
      SSC03785_1
      EX551288.1
      Tcir_isotig30649
      HC01808
      CB039008.1
      DAC01190_1
      GQ332406.1
      SR03532
      Acan_isotig10908
      CRC11983_1
      ACC22460_1
      AF344334.1
      MH04477
      CR01959
      HGC11130_1
      EX010763.1
      ACC16640_1
      PT04031
      BE420496.1
      FG353879.1
      NAC02274_1
      AF344333.1
      ES413619.1
      HCC06393_1
      EX535671.1
      HBC00356_1
      EX544347.1
      EX915317.1
      FG587286.1
      NBC05656_1
      Dviv_isotig34682
      FC821284.1
      MI02324
      RSC02332_1
      Oden_isotig06814
      ES744345.1
      Dviv_isotig17744
      TM01517
      Tcol_isotig04889
      Name_isotig00750
      AI132889.1
      SRC04496_1
      Tcir_isotig06163
      DA00821
      EX563342.1
      DN190787.1
      HQ452945.1
      ASC30531_1
      MP02232
      Tcir_isotig07266
      FD516827.1
      MI08897
      EX007359.1
      PPC03374_1
      EX910414.1
      Dviv_isotig17745
      HCC12589_1
      XI00450
      CRC03510_1
      BF918214.1
      AW330456.1
      LSC00587_1
      MHC01920_1
      Oden_isotig06815
      BU088565.1
      AA293982.1
      AS08740
      XIC03492_1
      PTC04678_1
      MJ00169
      JI465198.1
      DN557995.1
      DA03476
      PPC19646_1
      ES413778.1
      MPC01761_1
      MJC00039_1
      AI381150.1
      JI167718.1
      AAC00265_1
  Method: Gene