WormBase Tree Display for Gene: WBGene00162294

WBGene00162294 SMap: S_parent: Sequence: Cbre_Contig3
  Identity: Version: 2
    Name: CGC_name: Cbn-mmcm-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN23569
      Molecular_name: CBN23569
        CBN23569.1
        CN29448
      Public_name: Cbn-mmcm-1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:52 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cbn-mmcm-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mmcm
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 119.249 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        19.2854 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        219.212 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        26.7733 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        28.2692 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        47.2333 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        48.8968 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        51.6904 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
      WBls:0000038 56.4334 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        58.4506 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        60.4678 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (18)
      WBls:0000101 44.3551 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        77.0291 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00221286
      00221287
      00221288
      00221289
      00221290
      00221291
    Ortholog (32)
    Paralog: WBGene00154910 Caenorhabditis brenneri From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable cobalamin binding activity; metal ion binding activity; and methylmalonyl-CoA mutase activity. Is an ortholog of C. elegans mmcm-1. In C. elegans, mmcm-1 is involved in amino acid metabolic process and fatty acid metabolic process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN23569
    Corresponding_CDS_history: CBN23569:np197
    Corresponding_transcript: CBN23569.1
    Other_sequence: CBC00550_1
      CBC07487_1
      Tcir_isotig01975
      Tcir_isotig30227
      ASC17363_1
      HC09013
      JK315817.1
      HC02458
      FC543339.1
      SSC03218_1
      BI772821.1
      OOC00380_3
      Tcol_isotig13017
      FK807616.1
      SS00250
      Dviv_isotig22871
      FC547248.1
      HC00784
      EX558746.1
      EX545131.1
      HCC01132_1
      AS10975
      HCC04517_2
      EX910020.1
      Tcir_isotig01974
      Acan_isotig07560
      EX008283.1
      Name_isotig01253
      ACC00520_1
      CR02984
      HC06998
      EX553022.1
      Tcol_isotig18357
      CRC04493_1
      SRC05460_1
      PPC04703_1
      JO472435.1
      AE03276
      HCC01131_2
      FC540980.1
      ASC32826_1
      HC00734
      CJC11484_1
      EX561150.1
      SRC06971_1
      EX912666.1
      Tcol_isotig18324
      ASC26095_1
      JO468692.1
      HC06270
      TM03069
      EX543888.1
      HCC01132_2
      OOC01945_1
      TSC00892_1
      HC05904
      JI178982.1
      HBC17505_1
      Tcol_isotig02723
      JI166959.1
      FE909515.1
      AS15400
      EX535086.1
      FE914568.1
      TDC02209_1
      OOC00380_2
      EX549493.1
      ACC15355_1
      EX538478.1
      EX546749.1
      HCC01131_1
      ASC01402_1
      OOC00380_1
      AS01049
      EX538130.1
      AE03667
      HCC04517_1
      EX566061.1
      HCC04379_1
      FC819601.1
      Oden_isotig17450
      FK803495.1
      HC02389
      EX536264.1
      SSC03830_1
      HC06250
      FC547869.1
      PP01026
      EX544004.1
      HCC11090_1
      AYC02434_1
      JI166182.1
      JI213844.1
      Tcol_isotig15931
      EX556099.1
      HCC11599_1
      TS02616
      Tcol_isotig12621
      BM052069.1
      SR04489
      HC06765
      HC05903
      HCC03689_1
      AE00942
      BM174788.1
      FC813721.1
      EX008717.1
      FE913710.1
      HC02042
      JI174756.1
      BG577541.1
      SS02820
      Oden_isotig17449
      HCC04476_1
      AS04699
      Hbac_isotig01620
      EX547752.1
      CB013625.1
      CRC10415_1
      ACC00905_1
      HC02313
      EY460917.1
      HC02474
      EX548548.1
      TMC00555_1
      HBC04165_1
      AE03874
      Tcol_isotig02722
      HCC04308_1
      JO472287.1
      AE04667
      AE00012
      HC02473
      CJC01468_1
  Experimental_info: Microarray_results: GPL14142_CBN23569_994-1053_0.861_23_C
      GPL14142_CBN23569_1159-1218_0.694_138_B
      GPL14142_CBN23569_1293-1352_0.678_147_A
  Method: Gene