WormBase Tree Display for Gene: WBGene00163427

WBGene00163427 SMap: S_parent: Sequence: Cbre_Contig112
  Identity: Version: 2
    Name: CGC_name: Cbn-idha-1.1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN24702
      Molecular_name: CBN24702
        CBN24702.1
        CN27014
      Public_name: Cbn-idha-1.1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:52 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Cbn-idha-1.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: idha
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        25.367 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        50.734 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        64.7837 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        66.2913 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        68.4618 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        76.8451 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        79.0794 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
      WBls:0000038 128.009 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        129.511 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        131.013 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (17)
      WBls:0000101 78.6744 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
        92.7914 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
    GO_annotation: 00222216
    Ortholog (34)
    Paralog: WBGene00141005 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00139599 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00145154 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00161173 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to be involved in tricarboxylic acid cycle. Is an ortholog of C. elegans idha-1. In C. elegans, idha-1 is involved in protein folding. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN24702
    Corresponding_CDS_history: CBN24702:np197
    Corresponding_transcript: CBN24702.1
    Other_sequence: CBC14619_1
      GR19464
      CR02168
      Tcol_isotig25898
      ES272999.1
      HBC23160_1
      SSC02261_1
      EX008841.1
      CR06774
      ES567219.1
      Oden_isotig11389
      Dviv_isotig14401
      EX012033.1
      HBC00958_1
      Dviv_isotig14399
      EX010487.1
      GR19465
      BXC00479_1
      Oden_isotig11386
      EX012123.1
      SRC00150_1
      Acan_isotig08692
      FC553992.1
      ES410769.1
      CR09841
      HG07930
      Oden_isotig29345
      GP03282
      GRC05448_1
      HS01138
      CRC01987_1
      EY472053.1
      SS01858
      Oden_isotig11387
      Tcir_isotig26617
      HBC12823_1
      OOC02206_1
      FC547641.1
      Hbac_isotig01312
      EX008354.1
      Oden_isotig11388
      GPC02598_1
      CRC12235_1
      HCC00560_1
      EX912644.1
      HSC01481_1
  Experimental_info: Microarray_results: GPL14142_CBN02280_520-579_0.911_5_C
      GPL14142_CBN02280_903-962_0.824_38_B
      GPL14142_CBN02280_995-1054_0.611_106_A
  Method: Gene