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WormBase Tree Display for Gene: WBGene00163782

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Name Class

WBGene00163782SMapS_parentSequenceCbre_Contig33
IdentityVersion2
NameCGC_nameCbn-crt-1.2From_analysisInferred_from_orthology
Sequence_nameCBN25057
Molecular_nameCBN25057
CBN25057.1
CN24166
Other_nameCBN25057
Cbn-crt-1From_analysisInferred_from_orthology
Public_nameCbn-crt-1.2
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:28WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-crt-1
220 Mar 2018 10:26:13WBPerson4025Name_changeCGC_nameCbn-crt-1.2
Other_nameCbn-crt-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcrt
RNASeq_FPKMWBls:0000002 (11)
WBls:0000004189.748From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
94.874From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
WBls:0000024155.383From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
159.546From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
159.863From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
387.136From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
432.652From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
WBls:0000038481.985From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
520.835From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
559.685From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:0000041 (17)
WBls:0000101215.347From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
218.049From_analysisRNASeq.brenneri.total_over_all_stages.control_median
GO_annotation00222511
00222512
00222513
00222514
Ortholog (34)
ParalogWBGene00149953Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00163673Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity and unfolded protein binding activity. Predicted to be involved in protein folding. Predicted to be located in endoplasmic reticulum. Is an ortholog of C. elegans crt-1. In C. elegans, crt-1 is involved in several processes, including IRE1-mediated unfolded protein response; determination of adult lifespan; and hemidesmosome assembly.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN25057
Corresponding_transcriptCBN25057.1
Other_sequenceCBC00113_1
CBC00837_1
CBC09215_1
NB12095
ES743663.1
GW410848.1
PVC01982_1
HBC00231_1
GO239236.1
HSC00996_1
EW742320.1
Tcol_isotig04079
FG974735.1
PPC00388_1
FK808623.1
FC811593.1
SRC07317_1
FG979597.1
FG976846.1
GQ396798.1
BF599213.1
FK800143.1
BXC01393_1
AW257783.1
HG07620
EX914867.1
HC02895
AW288154.1
HS00702
FF680619.1
FK804151.1
CJC08093_1
CD374667.1
FC816827.1
GRC00883_1
HG04770
BMC12460_1
FF680034.1
FK804448.1
WBC00554_1
GR12131
FC818469.1
AI601087.1
CRC09986_1
SRC09014_1
OVC01148_1
Dviv_isotig28546
EU360890.1
EX547360.1
CR10158
FG974663.1
FK801322.1
AF052978.1
CR06782
FC811926.1
GR978289.1
BG577619.1
HS01102
SRC08177_1
ES570222.1
FC817523.1
HC00341
SSC05304_1
FC819861.1
SRC08389_1
FC814815.1
FG975235.1
FK800686.1
HC03140
FK801733.1
AJ006790.1
FC814983.1
DI00926
EX547612.1
FG980835.1
AI438743.1
SRC07132_1
BMC03611_1
JI476030.1
EX541018.1
HGC10664_1
ACC06019_1
SRC08312_1
SRC09010_1
FF679260.1
EX538674.1
JI467314.1
FD514481.1
FC814946.1
EX537361.1
BM277319.1
FG975079.1
EX013424.1
TMC00495_1
GW413452.1
HGC10407_1
BF199430.1
Tcol_isotig04080
AI665769.1
JI467003.1
HG03578
FC815558.1
TSC08361_1
FC817154.1
SS01569
EX912716.1
AI692154.1
AW288222.1
SRC08876_1
EX535407.1
ES566192.1
FG977401.1
OVC03386_1
AW288141.1
BM174321.1
BMC13759_1
CD455808.1
AI374093.1
FG976762.1
SRC08917_1
FF678582.1
GU013560.1
FC819542.1
FC813921.1
ES411154.1
CR12508
HG05027
CR02845
SRC10353_1
AJ001621.1
PT00127
FK808957.1
XI00925
DAC00389_1
Name_isotig01181
EX502563.1
GQ150476.1
AS00961
JI169766.1
BU087110.1
AE00766
SC00167
XIC00780_1
AI111223.1
TMC01489_1
FC811319.1
BM174370.1
BG467567.1
CRC00528_1
PP00609
JI172767.1
CJC00580_3
AA668089.1
RS07319
FC545220.1
EW741997.1
AI368270.1
FK802530.1
FG580656.1
EV851270.1
ES741528.1
FF678369.1
MHC03324_1
NBC00808_1
CR11420
Oden_isotig17754
JI245261.1
GU585910.1
NB08442
NAC00261_1
FG972835.1
BMC04366_1
JI461351.1
CJC01164_1
PPC00042_1
MH08133
FG975137.1
AF402771.1
SR01041
FF679531.1
BUC00817_1
HG00221
FG971182.1
SRC09491_1
FG977817.1
SRC08458_1
AYC02576_1
GR978885.1
OVC03948_1
RSC04344_1
SRC00185_1
EL889874.1
BMC06194_1
GR978038.1
EX014870.1
AI603821.1
FF678664.1
TM01780
FC809636.1
EX551539.1
CJC00580_1
Tcol_isotig04078
SRC08771_1
FK809402.1
FK803046.1
FF681496.1
FG978119.1
ES739911.1
OVC08131_1
Hbac_isotig01528
FC813083.1
SRC08360_1
Tcir_isotig15174
CD455381.1
HQ843774.1
FC809666.1
XIC01238_1
SRC09241_1
MethodGene