WormBase Tree Display for Gene: WBGene00192253

WBGene00192253 SMap: S_parent: Sequence: Cbre_Contig70
  Identity: Version: 2
    Name: CGC_name: Cbn-unc-32 From_analysis: Inferred_from_orthology
      Sequence_name: CBN30288
      Molecular_name: CBN30288
        CBN30288.1
        CN35052
      Public_name: Cbn-unc-32
    Species: Caenorhabditis brenneri
    History: Version_change: 1 20 May 2009 11:55:53 WBPerson1847 Event: Created
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cbn-unc-32
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 107.976 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        53.988 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        38.8457 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        48.8458 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        52.5226 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        59.2838 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        60.6583 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
      WBls:0000038 47.0611 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        51.3975 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        55.7339 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (17)
      WBls:0000101 24.1325 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        34.0942 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00228070
      00228071
      00228072
      00228073
    Ortholog (31)
    Paralog: WBGene00150020 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00151514 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00190073 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00191644 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00195042 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00190669 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00193147 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable proton-transporting ATPase activity, rotational mechanism. Predicted to be involved in proton transmembrane transport. Predicted to be part of vacuolar proton-transporting V-type ATPase, V0 domain. Is an ortholog of C. elegans unc-32. In C. elegans, unc-32 is involved in several processes, including cholinergic synaptic transmission; defense response to Gram-positive bacterium; and positive regulation of neurotransmitter secretion. Paper_evidence: WBPaper00065943
          Curator_confirmed (2)
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN30288
    Corresponding_transcript: CBN30288.1
    Other_sequence: ACC27957_1
      SR01889
      JI476636.1
      Oden_isotig18946
      MCC00048_1
      ES568051.1
      XI03319
      MH04003
      HG00963
      Acan_isotig17836
      FC548098.1
      AS05322
      PPC02052_1
      MH03815
      FC819356.1
      EY463685.1
      AJ616456.1
      Name_isotig01992
      Hbac_isotig00543
      FC810152.1
      CJC04313_1
      TSC07889_1
      SR04330
      EX563889.1
      ES563764.1
      Acan_isotig17492
      BF400297.1
      HG04484
      MJ04859
      Tcir_isotig21121
      ES410847.1
      XIC02850_1
      FC548961.1
      ES410961.1
      CRC06291_1
      Tcol_isotig16935
      ACC09758_1
      Dviv_isotig13922
      JO472469.1
      NAC00347_1
      ACC05431_1
      SS02648
      EY466124.1
      Tcir_isotig16492
      Dviv_isotig13919
      GO252540.1
      BG467540.1
      ASC01106_1
      Dviv_isotig13921
      Dviv_isotig13920
      Hbac_isotig03389
      JI175420.1
      FC546549.1
      JI171090.1
      JI479908.1
      TIC00279_1
      GP02919
      GR979134.1
      Hbac_isotig05655
      Acan_isotig09807
      ACC37142_1
      PPC09481_1
      XIC01660_1
      HGC11400_1
      SRC02190_1
      HS00685
      EY465219.1
      CR12034
      FC543825.1
      HBC00133_1
      XI03869
      MHC00809_1
      Hbac_isotig00542
      HSC00305_1
      MC00628
      EY467804.1
      FC815525.1
      EY468107.1
      Tcir_isotig17010
      MHC01135_1
      EY473793.1
      SSC02919_1
      HGC04290_1
      JI166362.1
      Name_isotig06322
      OVC08350_1
      Tcir_isotig09732
      BU606334.1
      AS01642
      SC00413
      PP02479
      JI166214.1
      GPC01473_1
      MJC03988_1
  Experimental_info: Microarray_results: GPL14142_CBN30288_1757-1816_0.926_1_C
      GPL14142_CBN30288_1967-2026_0.888_15_B
      GPL14142_CBN30288_2269-2328_0.619_319_A
  Method: Gene