WormBase Tree Display for Gene: WBGene00240484

WBGene00240484 SMap: S_parent: Sequence: OVOC_OM1b_209
  Identity: Version: 2
    Name: CGC_name: Ovo-pam-1 From_analysis: Inferred_from_orthology
      Sequence_name: OVOC3675
      Molecular_name: OVOC3675
        OVOC3675.1
        OVP01885
      Public_name: Ovo-pam-1
    Species: Onchocerca volvulus
    History: Version_change: 1 29 Nov 2013 15:05:33 WBPerson3111 Event: Imported: MAKER import
        2 24 Jan 2014 16:01:32 WBPerson4055 Name_change: CGC_name: Ovo-pam-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pam
    RNASeq_FPKM: WBls:0000101 10.1955 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_median
        14.7192 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_mean
      WBls:0000104 (16)
      WBls:0000107 6.46131 From_analysis: RNASeq.ovolvulus.WBls:0000107.control_mean
            RNASeq.ovolvulus.WBls:0000107.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
      WBls:0000108 23.5567 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_mean
        27.0533 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
        35.747 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
        7.86987 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
      WBls:0000664 36.6362 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
        40.3455 From_analysis: RNASeq.ovolvulus.WBls:0000664.control_mean
            RNASeq.ovolvulus.WBls:0000664.control_median
        44.0548 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
    GO_annotation: 00254424
      00254425
      00254426
    Ortholog (39)
    Paralog: WBGene00238094 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00241070 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00243037 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00243660 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00244968 Onchocerca volvulus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable metallopeptidase activity and zinc ion binding activity. Predicted to be involved in proteolysis. Is an ortholog of C. elegans pam-1. In C. elegans, pam-1 is involved in several processes, including exit from meiosis; first cell cycle pseudocleavage; and regulation of reproductive process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: OVOC3675
    Corresponding_transcript: OVOC3675.1
    Other_sequence: OF00901
      FG588384.1
      HG08684
      BMC08567_1
      Oden_isotig11270
      OFC01443_1
      OF00902
      AY883023.1
      FK800990.1
      GR13090
      GW410934.1
      Oden_isotig11268
      HC03371
      CJC17343_1
      JI459789.1
      FC819583.1
      FK809551.1
      MIC06820_1
      Dviv_isotig33307
      Acan_isotig07514
      Name_isotig05651
      AYC00246_1
      FF680686.1
      CBC13875_1
      FK803710.1
      Dviv_isotig24669
      HGC03588_1
      BUC02277_1
      JI166160.1
      JO467961.1
      HGC03309_1
      HGC10559_1
      Hbac_isotig06867
      HCC01692_1
      Oden_isotig26974
      HBC01196_1
      EX014762.1
      EX013783.1
      JI473137.1
      Oden_isotig11271
      CBC05488_1
      Oden_isotig11269
      Hbac_isotig01334
      MI07361
      CJC08234_1
      AE01461
      ES561086.1
      SR04474
      TSC09099_1
      OFC00014_1
      SRC05433_1
      HG00354
      HG07831
      PSC03252_1
  Method: Gene