WormBase Tree Display for Gene: WBGene00261245

WBGene00261245 SMap: S_parent: Sequence: SRAE_chr2
  Identity: Version: 1
    Name: Sequence_name: SRAE_2000104500
      Molecular_name: SRAE_2000104500
        SRAE_2000104500.1
        SRP10653
      Public_name: SRAE_2000104500
    Species: Strongyloides ratti
    History: Version_change: 1 01 May 2015 10:45:53 WBPerson4055 Event: Created
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000677 10.9829 From_analysis: RNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
        11.4528 From_analysis: RNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
        11.7569 From_analysis: RNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
        11.9713 From_analysis: RNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
        2.23555 From_analysis: RNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
        2.52215 From_analysis: RNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
      WBls:0000678 0.191561 From_analysis: RNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
        0.267637 From_analysis: RNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
        0.323367 From_analysis: RNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
        0.376076 From_analysis: RNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
        0.384132 From_analysis: RNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
        0.486718 From_analysis: RNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
        0.635786 From_analysis: RNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
        0.864163 From_analysis: RNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
      WBls:0000680 16.744 From_analysis: RNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
      WBls:0000682 226.187 From_analysis: RNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
    GO_annotation: 00270283
    Ortholog (125)
    Paralog (73)
    Structured_description: Automated_description: Predicted to be a structural constituent of cuticle. Is an ortholog of C. elegans col-167; col-166; and col-180. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: SRAE_2000104500
    Corresponding_transcript: SRAE_2000104500.1
    Other_sequence: EX014263.1
      GE638431.1
      MIC08240_1
      AJ544635.1
      JI480495.1
      CK850075.1
      HC02576
      ES408958.1
      AAC00367_1
      HCC00239_1
      AI151640.1
      EX015232.1
      Oden_isotig29309
      GE638662.1
      NBC00442_1
      WBC01674_1
      CK855139.1
      Hbac_isotig00238
      SSC02626_1
      Tcir_isotig23002
      AW257774.1
      WBC01438_1
      BU585605.1
      EX911741.1
      DVC00846_1
      GE638230.1
      HCC07270_1
      EX542436.1
      ACC10974_1
      HC03089
      CR00549
      LSC01809_1
      OF00303
      DN190914.1
      ASC04396_1
      BMC08961_1
      CN007728.1
      CK855478.1
      CK726310.1
      CJC05311_1
      DN190896.1
      GE638903.1
      ES743111.1
      AE04714
      ASC00165_1
      Tcol_isotig22311
      ES412433.1
      MI08650
      FF682187.1
      OOC00199_1
      ES411508.1
      BXC01287_1
      EX913062.1
      DN190271.1
      CJC03380_1
      HC05542
      Acan_isotig00538
      ES411903.1
      AA294144.1
      CK850313.1
      BF599232.1
      CK726354.1
      EX916187.1
      ES410212.1
      Dviv_isotig25155
      DN191155.1
      MI02762
      OOC01364_1
      DI02292
      PP00562
      TDC02529_1
      HCC01212_1
      EX548425.1
      CJC04428_1
      EX911248.1
      CK850084.1
      EX912161.1
      ES741725.1
      DN190350.1
      OFC00702_1
      DN190832.1
      MP00985
      Hbac_isotig00237
      JI180185.1
      FG647755.1
      GE639063.1
      FG583892.1
      EX012787.1
      EV851154.1
      ES410485.1
      NB08049
      EX914684.1
      JI174400.1
      ACC08128_1
      ES413196.1
      CK855125.1
      GPC01957_1
      Oden_isotig29081
      OVC01073_1
      FE911582.1
      PTC01320_1
      JI174753.1
      Tcol_isotig16113
      BF154370.1
      GE638674.1
      EX008686.1
      Dviv_isotig23920
      EX560011.1
      ES742745.1
      AA618722.1
      DN190937.1
      CJC00810_2
      AA618857.1
      DIC01871_1
      MPC00107_1
      SS01363
      FK804677.1
      EX914517.1
      ES413253.1
      DN190294.1
      EX549687.1
      GO240361.1
      FG619827.1
      EX007574.1
      TCC01441_1
      AS01374
      GE638578.1
      ES409579.1
      ES742466.1
      CK850418.1
      BXC06687_1
      HBC19014_1
      EX914659.1
      BMC04888_1
      Dviv_isotig25718
      MH04079
      JI246510.1
      CK850846.1
      DN191157.1
      EG025643.1
      AI665834.1
      Tcol_isotig24003
      JI230366.1
      AS04391
      EX010745.1
      EX535050.1
      EX911705.1
      MHC10405_1
      GP02572
      DN190687.1
      EX543709.1
      EX541359.1
      CK850805.1
      ACC18124_1
      PT02814
      Tcir_isotig23871
      CK855378.1
      EX547832.1
      DN190339.1
      AI111335.1
      ES742522.1
      DN191095.1
      Tcir_isotig09090
      ES408844.1
      HBC00274_1
      DN191089.1
      GO240568.1
      EX915635.1
      JI226600.1
      NAC00184_1
      Tcol_isotig19568
      EX008716.1
      PT01915
      BE760986.1
      Acan_isotig19701
      Oden_isotig15501
      AA618930.1
      ES740224.1
      DN190332.1
      MIC06046_1
      AS09272
      AE03470
  Experimental_info: Expression_cluster: WBPaper00050919:down_parasitic_vs_free-living_mRNA
      WBPaper00050919:up_infective-L3_vs_parasitic_mRNA
  Method: Gene