WormBase Tree Display for Gene: WBGene00276811

WBGene00276811 SMap: S_parent: Sequence: PPA_ChrI
  Identity: Version: 5
    Name: CGC_name: Ppa-sluh-7 From_analysis: Inferred_from_orthology
      Sequence_name: PPA38442
      Molecular_name: PPA38442
        PPA38442.1
        PP75508
      Public_name: Ppa-sluh-7
    Species: Pristionchus pacificus
    History: Version_change: 1 24 Nov 2017 16:14:21 WBPerson4055 Event: Created
        2 21 Oct 2019 15:17:20 WBPerson4055 Event: Split_into: WBGene00305084
        3 04 Jun 2020 14:38:21 WBPerson1983 Name_change: CGC_name: Ppa-sluh-7
        4 28 May 2021 19:05:21 WBPerson1983 Name_change: CGC_name: Removed
        5 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Ppa-sluh-7
      Split_into: WBGene00305084
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sluh
    RNASeq_FPKM: WBls:0000032 101.174 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 44.5542 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        48.5761 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
    GO_annotation: 00283200
      00283201
    Ortholog (30)
    Structured_description: Automated_description: Predicted to enable pre-mRNA 3'-splice site binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Is an ortholog of C. elegans sluh-7. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA38442
    Corresponding_CDS_history: PPA38442:pp274
    Corresponding_transcript: PPA38442.1
    Other_sequence: FC815486.1
      CR07153
      MHC06906_1
      EX538145.1
      SSC05680_1
      Tcol_isotig22724
      Tcol_isotig08569
      Dviv_isotig08502
      ES413117.1
      HS01231
      FK801635.1
      DN556943.1
      FK809761.1
      Hbac_isotig01941
      PPC02139_1
      EX910443.1
      FK800829.1
      DN558141.1
      Tcol_isotig08570
      FK800228.1
      Oden_isotig10901
      EY459520.1
      CRC04254_1
      JO469690.1
      EZ421872.1
      XI02545
      ACC08230_1
      HG04150
      SRC02161_1
      Oden_isotig10902
      EX914564.1
      LSC00309_1
      ACC35740_1
      FK802494.1
      EY464549.1
      JI472759.1
      FG973407.1
      Oden_isotig10903
      HGC10934_1
      EY467591.1
      Acan_isotig01031
      PP02046
      Hbac_isotig01652
      Tcol_isotig23769
      PTC01456_1
      PPC20738_1
      CBC00212_1
      Acan_isotig01032
      ACC30210_1
      CBC00212_2
      FC815800.1
      Acan_isotig01030
      FC810111.1
      JI168605.1
      SS02973
      Acan_isotig01029
      MH01231
      HC09088
      FG976574.1
      JI470134.1
      SR00633
      Dviv_isotig08503
      EX007066.1
      HBC01105_1
  Experimental_info: Microarray_results: GPL14372_Probes_37268
      GPL14372_Probes_37269
      GPL14372_Probes_37270
      GPL14372_Probes_37271
  Remark: [210528 pad] The CGC name Ppa-sluh-7 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene