WormBase Tree Display for Gene: WBGene00304432

WBGene00304432 SMap: S_parent: Sequence: PPA_ChrII
  Identity: Version: 5
    Name: CGC_name: Ppa-pqm-1 From_analysis: Inferred_from_orthology
      Sequence_name: PPA46653
      Molecular_name: PPA46653
        PPA46653.1
        PP74436
      Public_name: Ppa-pqm-1
    Species: Pristionchus pacificus
    History: Version_change: 1 21 Feb 2019 14:49:04 WBPerson4055 Event: Created
        2 08 May 2019 10:09:24 WBPerson1983 Name_change: CGC_name: Ppa-pqm-1
        3 04 Feb 2020 15:43:57 WBPerson1983 Name_change: CGC_name: Ppa-pqm-1.1
                Other_name: Ppa-pqm-1
        4 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
        5 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Ppa-pqm-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pqm
    RNASeq_FPKM: WBls:0000032 105.82 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 105.82 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        156.252 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        87.3573 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
    Ortholog (24)
    Paralog: WBGene00304946 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Zinc finger C2H2 superfamily and Zinc finger C2H2-type. Is an ortholog of C. elegans pqm-1. In C. elegans, pqm-1 is involved in several processes, including defense response to other organism; positive regulation of macromolecule biosynthetic process; and regulation of vitellogenesis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA46653
    Corresponding_transcript: PPA46653.1
    Other_sequence: EX555285.1
      EX539013.1
      Acan_isotig09145
      AYC01909_1
      SSC00244_1
      Dviv_isotig16695
      EX561575.1
      Name_isotig05675
      Hbac_isotig07014
      JI169755.1
      Tcol_isotig01690
      EX553479.1
      CRC01968_1
      EX564072.1
      Dviv_isotig16694
      EX559167.1
      AE01462
      Tcol_isotig01692
      ES409875.1
      EX565941.1
      PT00143
      ACC10032_1
      EX544278.1
      Tcol_isotig01691
      Hbac_isotig01622
      JI169212.1
      Oden_isotig09821
      HBC10259_1
      EX543800.1
      SS01322
      EX552281.1
      Dviv_isotig13435
      EX551546.1
      Oden_isotig09822
      PPC15681_1
      Oden_isotig09820
      CR12641
      CR12619
      PTC00900_1
      Tcir_isotig28645
  Experimental_info: Microarray_results: GPL14372_Probes_59457
      GPL14372_Probes_59458
      GPL14372_Probes_84434
    Expression_cluster: WBPaper00041466:PP_S.marcescens_regulated
      WBPaper00041606:PP_S.marcescens_regulated
      WBPaper00041606:PP_X.nematophila_regulated
  Remark: [210528 pad] The CGC name Ppa-pqm-1.1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    Removed duplicate Other_name Ppa-pqm-1 Curator_confirmed: WBPerson1983
  Method: Gene