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WormBase Tree Display for Gene: WBGene00003279

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Name Class

WBGene00003279EvidencePaper_evidenceWBPaper00004928
WBPaper00004927
SMapS_parentSequenceF36H1
IdentityVersion1
NameCGC_namemir-51Person_evidenceWBPerson18
Sequence_nameF36H1.7
Molecular_nameF36H1.7
F36H1.7a
F36H1.7b
Other_namecel-mir-51RemarkmiRBase V21 import
Cel-Mir-10-P2lRemarkMirGeneDB 2.1 import
CELE_F36H1.7Accession_evidenceNDBBX284604
Public_namemir-51
DB_infoDatabasemiRBaseaccMI0000022
SignaLinkmirnacel-mir-51
MirGeneDBcelCel-Mir-10-P2l
NDBlocus_tagCELE_F36H1.7
NCBIgene259923
RefSeqproteinNR_000447.2
RNAcentralURSidURS0000313C3C
URS00003FDD8B
URS000041A11D
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:31WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001265
Gene_classmir
AlleleWBVar01500079
WBVar00090844
WBVar01498996
WBVar01499925
WBVar01795457
WBVar00940971
WBVar02123093
WBVar02124207
WBVar00288072
WBVar01500245
StrainWBStrain00027461
WBStrain00027571
In_clusterMIR-10
RNASeq_FPKMWBls:0000002144.062From_analysisRNASeq.elegans.total_over_all_stages.control_mean
1e-10From_analysis (82)
39.698From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP000401.SRX047635
52.2873From_analysisRNASeq.elegans.WBStrain00030567.WBls:0000002.Male.WBbt:0007833.SRP003783.SRX028195
WBls:00000031e-10From_analysis (8)
48.8737From_analysisRNASeq.elegans.WBStrain00004346.WBls:0000003.Male.WBbt:0007833.SRP000401.SRX011569
68.4928From_analysisRNASeq.elegans.WBStrain00004346.WBls:0000003.Male.WBbt:0007833.SRP000401.SRX037198
7.69394From_analysisRNASeq.elegans.WBls:0000003.control_mean
WBls:000000411.4741From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP000401.SRX004864
1e-10From_analysis (44)
202.358From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP000401.SRX037197
60.709From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP000401.SRX004866
WBls:00000061e-10From_analysis (2)
WBls:00000071e-10From_analysis (12)
WBls:00000081e-10From_analysis (3)
WBls:00000101e-10From_analysis (15)
WBls:00000131e-10From_analysis (11)
WBls:00000141e-10From_analysis (19)
WBls:00000151e-10From_analysis (24)
WBls:00000171e-10From_analysis (10)
WBls:00000201e-10From_analysis (16)
WBls:000002110.921From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000021.Hermaphrodite.WBbt:0007833.SRP000401.SRX004865
1e-10From_analysis (17)
278.913From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000021.Hermaphrodite.WBbt:0007833.SRP000401.SRX049270
74.2219From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000021.Hermaphrodite.WBbt:0007833.SRP000401.SRX047446
WBls:00000231e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000023.Hermaphrodite.WBbt:0007833.SRP015688.SRX185639
WBls:0000024158.296From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP003783.SRX028197
1642.45From_analysisRNASeq.elegans.WBls:0000024.control_mean
18.943From_analysisRNASeq.elegans.WBStrain00024166.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP017621.SRX212112
19305.7From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP010374.SRX118118
1e-10From_analysis (66)
2247.45From_analysis (2)
23.4533From_analysisRNASeq.elegans.WBStrain00026383.WBls:0000024.Hermaphrodite.WBbt:0003666.SRP000401.SRX145445
9653.38From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP010374.SRX118117
WBls:000002714.8112From_analysisRNASeq.elegans.WBls:0000027.control_mean
1e-10From_analysis (13)
53.8527From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP010374.SRX118120
79.4481From_analysis (2)
WBls:000003112.7297From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000031.Hermaphrodite.WBbt:0007833.SRP000401.SRX008139
1e-10From_analysis (6)
WBls:000003212.5459From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000032.Hermaphrodite.WBbt:0007833.SRP000401.SRX008138
143.12From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000032.Hermaphrodite.WBbt:0007833.SRP000401.SRX103984
1e-10From_analysis (6)
WBls:00000351153.4From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP010374.SRX118139
1171.56From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP010374.SRX118143
1197.7From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP010374.SRX118144
164.599From_analysisRNASeq.elegans.WBStrain00047070.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP038704.SRX474210
1e-10From_analysis (23)
219.95From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP010374.SRX118128
276.423From_analysisRNASeq.elegans.WBls:0000035.control_mean
47.8526From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392700
79.4608From_analysis (2)
WBls:0000038114.198From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP000401.SRX049268
13.5651From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP000401.SRX008144
1e-10From_analysis (82)
234.869From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP000401.SRX049269
250.339From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP010374.SRX118127
699.056From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP010374.SRX118140
70.2312From_analysisRNASeq.elegans.WBStrain00030566.WBls:0000038.Male.WBbt:0007833.SRP003783.SRX028196
77.1781From_analysisRNASeq.elegans.WBls:0000038.control_mean
WBls:000004119.2241From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP000401.SRX036967
1e-10From_analysis (29)
2.9739From_analysisRNASeq.elegans.WBls:0000041.control_mean
WBls:000005215.5744From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000052.Hermaphrodite.WBbt:0007833.SRP000401.SRX008140
1e-10From_analysis (9)
WBls:0000063120.682From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP000401.SRX103990
15.9084From_analysisRNASeq.elegans.WBStrain00034434.WBls:0000063.Hermaphrodite.WBbt:0005175.SRP049412.SRX747678
1e-10From_analysis (98)
24.8711From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426014
45.2472From_analysisRNASeq.elegans.WBStrain00024040.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP015918.SRX189886
53.1343From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426013
WBls:00000641e-10From_analysis (14)
WBls:000006511.7626From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000065.Hermaphrodite.WBbt:0007833.SRP037555.SRX469112
1e-10From_analysis (15)
WBls:00000681e-10From_analysis (6)
WBls:00001311e-10From_analysis (9)
WBls:00001411e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000141.Hermaphrodite.WBbt:0007833.SRP029448.SRX343161
WBls:00001511e-10From_analysis (14)
WBls:00001711e-10From_analysis (15)
WBls:00001811e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000181.Hermaphrodite.WBbt:0007833.SRP029448.SRX343164
WBls:00001911e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000191.Hermaphrodite.WBbt:0007833.SRP029448.SRX343165
WBls:00002011e-10From_analysis (12)
WBls:00002211e-10From_analysis (10)
WBls:00002311e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000231.Hermaphrodite.WBbt:0007833.SRP029448.SRX343167
WBls:00002511e-10From_analysis (10)
WBls:00002611e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000261.Hermaphrodite.WBbt:0007833.SRP029448.SRX343169
WBls:00002811e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000281.Hermaphrodite.WBbt:0007833.SRP029448.SRX343170
WBls:00002911e-10From_analysis (13)
WBls:00003011e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000301.Hermaphrodite.WBbt:0007833.SRP029448.SRX343172
WBls:00003111e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000311.Hermaphrodite.WBbt:0007833.SRP029448.SRX343173
WBls:00003211e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000321.Hermaphrodite.WBbt:0007833.SRP029448.SRX343174
WBls:00003311e-10From_analysis (2)
WBls:00003511e-10From_analysis (2)
WBls:00003611e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000361.Hermaphrodite.WBbt:0007833.SRP029448.SRX343180
WBls:00003811e-10From_analysis (9)
WBls:00003911e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000391.Hermaphrodite.WBbt:0007833.SRP029448.SRX343181
WBls:00004011e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000401.Hermaphrodite.WBbt:0007833.SRP029448.SRX343182
WBls:00004211e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000421.Hermaphrodite.WBbt:0007833.SRP029448.SRX343184
WBls:00004311e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000431.Hermaphrodite.WBbt:0007833.SRP029448.SRX343185
WBls:00004511e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000451.Hermaphrodite.WBbt:0007833.SRP029448.SRX343186
WBls:00004611e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000461.Hermaphrodite.WBbt:0007833.SRP029448.SRX343187
WBls:00004711e-10From_analysis (7)
WBls:00004911e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000491.Hermaphrodite.WBbt:0007833.SRP029448.SRX343191
WBls:00005011e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000501.Hermaphrodite.WBbt:0007833.SRP029448.SRX343192
WBls:00005111e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000511.Hermaphrodite.WBbt:0007833.SRP029448.SRX343194
WBls:00005211e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000521.Hermaphrodite.WBbt:0007833.SRP029448.SRX343195
WBls:00005311e-10From_analysis (2)
WBls:00005411e-10From_analysis (2)
WBls:00005511e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000551.Hermaphrodite.WBbt:0007833.SRP029448.SRX343200
WBls:00005611e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000561.Hermaphrodite.WBbt:0007833.SRP029448.SRX343201
WBls:00005811e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000581.Hermaphrodite.WBbt:0007833.SRP029448.SRX343202
WBls:00006211e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000621.Hermaphrodite.WBbt:0007833.SRP029448.SRX343203
WBls:00006741e-10From_analysis (6)
WBls:00006761e-10From_analysis (4)
WBls:00006941e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000694.Hermaphrodite.WBbt:0007833.SRP029448.SRX343205
WBls:00006951e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000695.Hermaphrodite.WBbt:0007833.SRP029448.SRX343206
WBls:00006961e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000696.Hermaphrodite.WBbt:0007833.SRP029448.SRX343207
WBls:00006971e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000697.Hermaphrodite.WBbt:0007833.SRP029448.SRX343208
WBls:00006991e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000699.Hermaphrodite.WBbt:0007833.SRP029448.SRX343210
WBls:00007001e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000700.Hermaphrodite.WBbt:0007833.SRP029448.SRX343211
WBls:00007011e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000701.Hermaphrodite.WBbt:0007833.SRP029448.SRX343212
WBls:00007021e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000702.Hermaphrodite.WBbt:0007833.SRP029448.SRX343213
WBls:00007031e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000703.Hermaphrodite.WBbt:0007833.SRP029448.SRX343214
Structured_descriptionConcise_descriptionmir-51 encodes a microRNA, a small non-protein coding RNA and has a potential ortholog in C. briggsae; mir-51 is expressed constitutively throughout development; many of the known microRNAs are involved in post-transcriptional regulation of genes; the precise function of mir-51 is not known.Paper_evidenceWBPaper00004927
WBPaper00005825
Curator_confirmedWBPerson324
Date_last_updated18 Jan 2005 00:00:00
Automated_descriptionExpressed in arcade cell and tail hypodermis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_transcriptF36H1.7
F36H1.7a
F36H1.7b
Other_sequenceAJ487575
Associated_featureWBsf979114
Experimental_infoRNAi_resultWBRNAi00112524Inferred_automaticallyRNAi_primary
WBRNAi00112525Inferred_automaticallyRNAi_primary
Expr_patternExpr2482
Expr8456
Expr9254
Expr10908
Drives_constructWBCnstr00005530
WBCnstr00006125
WBCnstr00013853
Expression_cluster (36)
Interaction (15)
Map_infoMapIVPosition4.78521Error0.00072
PositivePositive_cloneF36H1Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
Reference (25)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene