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WormBase Tree Display for Gene: WBGene00222710

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Name Class

WBGene00222710SMapS_parentSequenceBm_v4_ChrX_scaffold_001
IdentityVersion7
NameSequence_nameBm2449
Molecular_nameBm2449
Bm2449.1
BM41038
Other_nameBm-cka-1
TAG2449Curator_confirmedWBPerson4055
Bm1_24760ACurator_confirmedWBPerson4055
Bm1_24760Person_evidenceWBPerson5841
Bma-cka-1From_analysisInferred_from_orthology
Public_nameBm2449
SpeciesBrugia malayi
HistoryVersion_change110 Dec 2012 14:43:24WBPerson4055EventCreated
205 Jul 2013 11:43:21WBPerson4055Name_changeCGC_nameBma-cka-1
Other_nameBm-cka-1
320 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameBma-cka-1.2
Other_nameBma-cka-1
408 Feb 2019 15:42:29WBPerson1983Name_changeCGC_nameRemoved
501 Oct 2019 10:47:49WBPerson1983Name_changeCGC_nameBma-cka-1
627 Nov 2019 12:48:14WBPerson1983Name_changeCGC_nameBma-cka-1.2
Other_nameBma-cka-1
704 Feb 2020 15:43:57WBPerson1983Name_changeCGC_nameRemoved
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:0000097176.482From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.L3/L4.WBbt:0007833.SRP068692.SRX1539819
152.244From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
24.057From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
37.5213From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
38.4338From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
39.5603From_analysisRNASeq.brugia.WBls:0000097.control_median
40.6869From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
60.786From_analysisRNASeq.brugia.WBls:0000097.control_mean
71.7728From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
WBls:000007838.6468From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
40.3146From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
48.8082From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
49.9133From_analysisRNASeq.brugia.WBls:0000078.control_mean
52.6642From_analysisRNASeq.brugia.WBls:0000078.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
54.7155From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
55.9773From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
58.2668From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
WBls:000008025.6553From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
26.0151From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
32.3683From_analysisRNASeq.brugia.WBls:0000080.control_median
32.3916From_analysisRNASeq.brugia.WBls:0000080.control_mean
38.7214From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
39.1746From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
WBls:0000081 (24)
WBls:0000082101From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
105.529From_analysisRNASeq.brugia.WBls:0000082.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
155.404From_analysisRNASeq.brugia.WBls:0000082.control_mean
220.712From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
255.99From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
93.7878From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
WBls:0000083 (82)
WBls:00000927.69659From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
7.99244From_analysisRNASeq.brugia.WBls:0000092.control_mean
RNASeq.brugia.WBls:0000092.control_median
8.2883From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
WBls:00000946.44902From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
7.10828From_analysisRNASeq.brugia.WBls:0000094.control_mean
RNASeq.brugia.WBls:0000094.control_median
7.76755From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
WBls:000010155.9773From_analysisRNASeq.brugia.total_over_all_stages.control_median
77.3992From_analysisRNASeq.brugia.total_over_all_stages.control_mean
WBls:000066257.5068From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
60.1363From_analysisRNASeq.brugia.WBls:0000662.control_mean
RNASeq.brugia.WBls:0000662.control_median
62.7658From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
WBls:000066353.5934From_analysisRNASeq.brugia.WBls:0000663.control_mean
RNASeq.brugia.WBls:0000663.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
OrthologWBGene00240826Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00267460Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00285634Trichuris murisFrom_analysisWormBase-Compara
WBGene00297770Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00223152Brugia malayiFrom_analysisWormBase-Compara
WBGene00226297Brugia malayiFrom_analysisWormBase-Compara
WBGene00231955Brugia malayiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs affected by 20-hydroxyecdysone based on proteomic studies. Is predicted to encode a protein with the following domains: Protein kinase-like domain superfamily and Choline/ethanolamine kinase. Is an ortholog of O. volvulus OVOC4017.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSBm2449
Corresponding_transcriptBm2449.1
Other_sequence (18)
Experimental_infoExpression_clusterWBPaper00045439:BM_Cluster_P12
WBPaper00049261:20-hydroxyecdysone_upregulated_protein
WBPaper00051007:upregulated_F120_vs_F30
WBPaper00051007:upregulated_F120_vs_F42
WBPaper00051007:upregulated_M30_vs_F30
WBPaper00051007:upregulated_M30_vs_L4
WBPaper00051007:upregulated_M120_vs_F120
WBPaper00051007:upregulated_M120_vs_M30
WBPaper00051007:upregulated_M120_vs_M42
WBPaper00061765:L4_vs_Micro_Downregulated
ReferenceWBPaper00045439
Remark[190208 pad] The CGC name Bma-cka-1.2 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[200204 pad] The CGC name Bma-cka-1.2 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene