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WormBase Tree Display for Gene: WBGene00224290

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Name Class

WBGene00224290SMapS_parentSequenceBm_v4_ChrX_scaffold_001
IdentityVersion6
NameCGC_nameBma-pmk-3From_analysisInferred_from_orthology
Sequence_nameBm4029
Molecular_nameBm4029b
Bm4029b.1
BM29253
Bm4029c
BM34422
Bm4029c.1
Other_nameBm-pmk-3
TAG4029Curator_confirmedWBPerson4055
Bm1_54500ACurator_confirmedWBPerson4055
Bm1_54500Person_evidenceWBPerson5841
Public_nameBma-pmk-3
SpeciesBrugia malayi
HistoryVersion_change110 Dec 2012 14:43:24WBPerson4055EventCreated
205 Jul 2013 11:43:21WBPerson4055Name_changeCGC_nameBma-pmk-3
Other_nameBm-pmk-3
308 Feb 2019 15:42:27WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:25WBPerson1983Name_changeCGC_nameBma-pmk-3
528 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:29WBPerson1983Name_changeCGC_nameBma-pmk-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpmk
RNASeq_FPKMWBls:00000977.31083From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.L3/L4.WBbt:0007833.SRP068692.SRX1539819
14.5653From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
17.37From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
19.3183From_analysisRNASeq.brugia.WBls:0000097.control_median
21.2666From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
26.0976From_analysisRNASeq.brugia.WBls:0000097.control_mean
38.2042From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
56.8423From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
8.33745From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
WBls:000007810.8258From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
3.86291From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
5.74974From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
6.29919From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
7.22878From_analysisRNASeq.brugia.WBls:0000078.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
7.38673From_analysisRNASeq.brugia.WBls:0000078.control_mean
8.28205From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
9.45866From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
WBls:000008013.7249From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
15.3608From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
19.5605From_analysisRNASeq.brugia.WBls:0000080.control_mean
19.8055From_analysisRNASeq.brugia.WBls:0000080.control_median
24.2501From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
24.9063From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
WBls:0000081 (23)
WBls:000008210.4722From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
14.7918From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
5.2695From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
6.34388From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
6.67899From_analysisRNASeq.brugia.WBls:0000082.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
8.71127From_analysisRNASeq.brugia.WBls:0000082.control_mean
WBls:0000083 (82)
WBls:000009218.2277From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
18.6248From_analysisRNASeq.brugia.WBls:0000092.control_mean
RNASeq.brugia.WBls:0000092.control_median
19.0219From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
WBls:000009416.2418From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
16.6458From_analysisRNASeq.brugia.WBls:0000094.control_mean
RNASeq.brugia.WBls:0000094.control_median
17.0498From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
WBls:000010111.2736From_analysisRNASeq.brugia.total_over_all_stages.control_mean
9.94708From_analysisRNASeq.brugia.total_over_all_stages.control_median
WBls:000066218.3481From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
20.0588From_analysisRNASeq.brugia.WBls:0000662.control_mean
RNASeq.brugia.WBls:0000662.control_median
21.7696From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
WBls:000066310.177From_analysisRNASeq.brugia.WBls:0000663.control_mean
RNASeq.brugia.WBls:0000663.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
GO_annotation00241574
00241575
00241576
Contained_in_operonBMOP2615
Ortholog (32)
Paralog (12)
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity and protein kinase activity. Is an ortholog of C. elegans pmk-3. In C. elegans, pmk-3 is involved in several processes, including behavioral response to nicotine; p38MAPK cascade; and regulation of axon extension.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSBm4029b
Bm4029c
Corresponding_transcriptBm4029b.1
Bm4029c.1
Other_sequence (29)
Experimental_infoExpression_clusterWBPaper00051007:downregulated_M120_vs_F120
WBPaper00061765:L3_vs_Adult_Downregulated
ReferenceWBPaper00045439
Remark[190208 pad] The CGC name Bma-pmk-3 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Bma-pmk-3 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene