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WormBase Tree Display for Gene: WBGene00225550

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Name Class

WBGene00225550SMapS_parentSequenceBm_v4_Chr2_contig_001
IdentityVersion6
NameCGC_nameBma-pgam-5From_analysisInferred_from_orthology
Sequence_nameBm5289
Molecular_nameBm5289
Bm5289.1
BM40185
Other_nameBm-pgam-5
TAG5289Curator_confirmedWBPerson4055
Bm1_42520Person_evidenceWBPerson5841
Public_nameBma-pgam-5
SpeciesBrugia malayi
HistoryVersion_change110 Dec 2012 14:43:25WBPerson4055EventCreated
205 Jul 2013 11:43:21WBPerson4055Name_changeCGC_nameBma-pgam-5
Other_nameBm-pgam-5
308 Feb 2019 15:42:28WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:26WBPerson1983Name_changeCGC_nameBma-pgam-5
528 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:29WBPerson1983Name_changeCGC_nameBma-pgam-5
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpgam
RNASeq_FPKMWBls:000009746.2887From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.L3/L4.WBbt:0007833.SRP068692.SRX1539819
120.284From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
36.0006From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
37.978From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
41.1068From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
44.7321From_analysisRNASeq.brugia.WBls:0000097.control_median
48.3574From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
52.6657From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
56.0654From_analysisRNASeq.brugia.WBls:0000097.control_mean
WBls:000007819.1225From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
21.9736From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
27.3425From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
33.0528From_analysisRNASeq.brugia.WBls:0000078.control_mean
33.8971From_analysisRNASeq.brugia.WBls:0000078.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
39.7847From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
42.1079From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
47.141From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
WBls:000008045.9597From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
59.186From_analysisRNASeq.brugia.WBls:0000080.control_mean
59.7672From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
62.2375From_analysisRNASeq.brugia.WBls:0000080.control_median
64.7079From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
66.3091From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
WBls:0000081 (24)
WBls:000008249.1026From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
50.3457From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
57.0064From_analysisRNASeq.brugia.WBls:0000082.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
58.2041From_analysisRNASeq.brugia.WBls:0000082.control_mean
64.1783From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
70.3875From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
WBls:0000083 (82)
WBls:000009241.7749From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
42.2663From_analysisRNASeq.brugia.WBls:0000092.control_mean
RNASeq.brugia.WBls:0000092.control_median
42.7578From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
WBls:0000094104.604From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
91.9563From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
98.2802From_analysisRNASeq.brugia.WBls:0000094.control_mean
RNASeq.brugia.WBls:0000094.control_median
WBls:000010145.9597From_analysisRNASeq.brugia.total_over_all_stages.control_median
46.6639From_analysisRNASeq.brugia.total_over_all_stages.control_mean
WBls:000066293.4602From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
96.0567From_analysisRNASeq.brugia.WBls:0000662.control_mean
RNASeq.brugia.WBls:0000662.control_median
98.6533From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
WBls:000066357.2818From_analysisRNASeq.brugia.WBls:0000663.control_mean
RNASeq.brugia.WBls:0000663.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
Ortholog (32)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Histidine phosphatase superfamily; Histidine phosphatase superfamily (branch 1); and Histidine phosphatase superfamily, clade-1. Is an ortholog of C. elegans pgam-5.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSBm5289
Corresponding_transcriptBm5289.1
Other_sequence (43)
Experimental_infoExpression_clusterWBPaper00061765:L3_vs_Adult_Downregulated
WBPaper00061765:L4_vs_Adult_Downregulated
Remark[190208 pad] The CGC name Bma-pgam-5 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Bma-pgam-5 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene