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WormBase Tree Display for Gene: WBGene00227594

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Name Class

WBGene00227594SMapS_parentSequenceBm_v4_ChrX_scaffold_001
IdentityVersion6
NameCGC_nameBma-set-30From_analysisInferred_from_orthology
Sequence_nameBm7333
Molecular_name (12)
Other_nameBm-set-30
TAG7333Curator_confirmedWBPerson4055
Bm1_54580ACurator_confirmedWBPerson4055
Bm1_54580Person_evidenceWBPerson5841
Public_nameBma-set-30
SpeciesBrugia malayi
HistoryVersion_change110 Dec 2012 14:43:25WBPerson4055EventCreated
205 Jul 2013 11:43:21WBPerson4055Name_changeCGC_nameBma-set-30
Other_nameBm-set-30
308 Feb 2019 15:42:29WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:26WBPerson1983Name_changeCGC_nameBma-set-30
528 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:29WBPerson1983Name_changeCGC_nameBma-set-30
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classset
RNASeq_FPKMWBls:000009733.4761From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.L3/L4.WBbt:0007833.SRP068692.SRX1539819
15.8053From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
20.9688From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
24.0209From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
26.4643From_analysisRNASeq.brugia.WBls:0000097.control_median
26.6906From_analysisRNASeq.brugia.WBls:0000097.control_mean
28.9077From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
30.5704From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
39.8704From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
WBls:000007819.2053From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
21.6077From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
23.5182From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
25.1639From_analysisRNASeq.brugia.WBls:0000078.control_mean
26.4514From_analysisRNASeq.brugia.WBls:0000078.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
27.3199From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
28.8375From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
29.2074From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
WBls:000008043.2039From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
51.3461From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
52.0815From_analysisRNASeq.brugia.WBls:0000080.control_mean
54.0948From_analysisRNASeq.brugia.WBls:0000080.control_median
56.8436From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
56.9322From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
WBls:0000081 (24)
WBls:000008230.8156From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
31.255From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
38.6695From_analysisRNASeq.brugia.WBls:0000082.control_mean
42.4119From_analysisRNASeq.brugia.WBls:0000082.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
43.4699From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
45.3952From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
WBls:0000083 (82)
WBls:000009240.3399From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
41.1031From_analysisRNASeq.brugia.WBls:0000092.control_mean
RNASeq.brugia.WBls:0000092.control_median
41.8662From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
WBls:000009452.5014From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
54.3552From_analysisRNASeq.brugia.WBls:0000094.control_mean
RNASeq.brugia.WBls:0000094.control_median
56.209From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
WBls:000010130.8156From_analysisRNASeq.brugia.total_over_all_stages.control_median
33.458From_analysisRNASeq.brugia.total_over_all_stages.control_mean
WBls:000066238.0449From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
49.1432From_analysisRNASeq.brugia.WBls:0000662.control_mean
RNASeq.brugia.WBls:0000662.control_median
60.2416From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
WBls:000066355.5701From_analysisRNASeq.brugia.WBls:0000663.control_mean
RNASeq.brugia.WBls:0000663.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
Ortholog (28)
ParalogWBGene00226166Brugia malayiFrom_analysisWormBase-Compara
WBGene00229032Brugia malayiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: SET domain superfamily; Zinc finger, MYND-type; MYND finger; and Tetratricopeptide-like helical domain superfamily. Is an ortholog of C. elegans set-30.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSBm7333a
Bm7333b
Bm7333c
Bm7333d
Corresponding_transcriptBm7333a.1
Bm7333b.1
Bm7333c.1
Bm7333d.1
Other_sequence (13)
Experimental_infoExpression_clusterWBPaper00045439:BM_Cluster_P1
WBPaper00051007:downregulated_M120_vs_F120
ReferenceWBPaper00045439
Remark[190208 pad] The CGC name Bma-set-30 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Bma-set-30 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene