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WormBase Tree Display for Gene: WBGene00228452

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Name Class

WBGene00228452SMapS_parentSequenceBm_v4_Chr4_scaffold_001
IdentityVersion7
NameCGC_nameBma-chw-1From_analysisInferred_from_orthology
Sequence_nameBm8191
Molecular_nameBm8191a
Bm8191a.1
BM06534
Bm8191b
BM23748
Bm8191b.1
Other_nameTAG8191Curator_confirmedWBPerson4055
Bm1_10725ACurator_confirmedWBPerson4055
Bm-chw-1
TAG3525
Bm1_24595ACurator_confirmedWBPerson4055
Bm1_10725Person_evidenceWBPerson5841
Bm1_24595Person_evidenceWBPerson5841
Public_nameBma-chw-1
SpeciesBrugia malayi
HistoryVersion_change110 Dec 2012 14:43:25WBPerson4055EventCreated
212 Oct 2015 12:42:00WBPerson4055Name_changeCGC_nameBma-chw-1
312 Oct 2015 16:22:04WBPerson4055EventAcquires_mergeWBGene00223786
408 Feb 2019 15:42:29WBPerson1983Name_changeCGC_nameRemoved
508 May 2019 10:09:25WBPerson1983Name_changeCGC_nameBma-chw-1
628 May 2021 19:05:21WBPerson1983Name_changeCGC_nameRemoved
728 Jul 2021 11:12:28WBPerson1983Name_changeCGC_nameBma-chw-1
Acquires_mergeWBGene00223786
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classchw
RNASeq_FPKMWBls:00000971.23624From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.L3/L4.WBbt:0007833.SRP068692.SRX1539819
0.522914From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
0.865447From_analysisRNASeq.brugia.WBls:0000097.control_median
1.20798From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
0From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
21.3819From_analysisRNASeq.brugia.WBls:0000097.control_mean
52.2721From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
74.2882From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
WBls:00000780.818768From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
0.84586From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
0From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
2.0371From_analysisRNASeq.brugia.WBls:0000078.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
2.77871From_analysisRNASeq.brugia.WBls:0000078.control_mean
3.05691From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
3.26837From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
9.42399From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
WBls:000008023.8984From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
24.1911From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
46.4961From_analysisRNASeq.brugia.WBls:0000080.control_median
49.8279From_analysisRNASeq.brugia.WBls:0000080.control_mean
68.801From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
82.4211From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
WBls:0000081 (22)
WBls:00000825.91822From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
6.25397From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
7.22096From_analysisRNASeq.brugia.WBls:0000082.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
7.45938From_analysisRNASeq.brugia.WBls:0000082.control_mean
8.39957From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
9.50418From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
WBls:0000083 (81)
WBls:000009220.1983From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
21.1879From_analysisRNASeq.brugia.WBls:0000092.control_mean
RNASeq.brugia.WBls:0000092.control_median
22.1775From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
WBls:000009447.907From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
50.8522From_analysisRNASeq.brugia.WBls:0000094.control_mean
RNASeq.brugia.WBls:0000094.control_median
53.7974From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
WBls:000010113.2748From_analysisRNASeq.brugia.total_over_all_stages.control_mean
5.91822From_analysisRNASeq.brugia.total_over_all_stages.control_median
WBls:000066211.5051From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
3.72615From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
7.61562From_analysisRNASeq.brugia.WBls:0000662.control_mean
RNASeq.brugia.WBls:0000662.control_median
WBls:00006631.00344From_analysisRNASeq.brugia.WBls:0000663.control_mean
RNASeq.brugia.WBls:0000663.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
GO_annotation00247125
00247126
00247127
Ortholog (29)
ParalogWBGene00222376Brugia malayiFrom_analysisWormBase-Compara
WBGene00222871Brugia malayiFrom_analysisWormBase-Compara
WBGene00225194Brugia malayiFrom_analysisWormBase-Compara
WBGene00225547Brugia malayiFrom_analysisWormBase-Compara
WBGene00226988Brugia malayiFrom_analysisWormBase-Compara
WBGene00229795Brugia malayiFrom_analysisWormBase-Compara
WBGene00230416Brugia malayiFrom_analysisWormBase-Compara
WBGene00232979Brugia malayiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable GTP binding activity and GTPase activity. Predicted to be involved in small GTPase mediated signal transduction. Is an ortholog of C. elegans chw-1. In C. elegans, chw-1 is involved in establishment or maintenance of cell polarity and vulval development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSBm8191a
Bm8191b
Corresponding_transcriptBm8191a.1
Bm8191b.1
Other_sequenceGRC02065_1
Oden_isotig21620
GR12973
CR01151
Oden_isotig24504
JI178731.1
CRC02711_1
Experimental_infoExpression_clusterWBPaper00051007:downregulated_F30_vs_L4
WBPaper00051007:downregulated_M30_vs_F30
WBPaper00051007:downregulated_M120_vs_F120
WBPaper00061765:Adult_vs_Micro_Downregulated
WBPaper00061765:L3_vs_Adult_Upregulated
WBPaper00061765:L4_vs_Adult_Upregulated
ReferenceWBPaper00045439
Remark[190208 pad] The CGC name Bma-chw-1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Bma-chw-1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene